RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ZNF700Q9H0M5 742 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 CLMPQ9H6B4 373 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 PSMC3IPQ9P2W1 217 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-211ENST00000554310 OPTCQ9UBM4 332 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 ZNF180Q9UJW8 692 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 ASH1LQ9NR48 2969 aaKnown RBP12.33□□□□□ -0.44
SHMT2-211ENST00000554310 TTLL8A6PVC2 850 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 POC1B-GALNT4F8VUJ3 575 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 UBXN8O00124 270 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 CLEC3AO75596 197 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 FHP07954 510 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 MSH2P43246 934 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 GLRBP48167 497 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 KCNC1P48547 511 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 SEC24CP53992 1094 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 SLC18A1P54219 525 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 RAB8AP61006 207 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 IRF8Q02556 426 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 KCNC4Q03721 635 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 LAPTM5Q13571 262 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 E2F2Q14209 437 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 PCOLCEQ15113 449 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 TBCCQ15814 346 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 TOR1AIP1Q5JTV8 583 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 FAAH2Q6GMR7 532 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 IGFL2Q6UWQ7 119 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 ISLR2Q6UXK2 745 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 OR5T3Q8NGG3 340 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 PPP4R1Q8TF05 950 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 ESAMQ96AP7 390 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 MIB2Q96AX9 1013 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 TBC1D20Q96BZ9 403 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 PEX11GQ96HA9 241 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 WDR77Q9BQA1 342 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-211ENST00000554310 TUBB6Q9BUF5 446 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 RBCK1Q9BYM8 510 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 VPS11Q9H270 941 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 EPS8L2Q9H6S3 715 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 SLAMF7Q9NQ25 335 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 B3GNT3Q9Y2A9 372 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 ASB1Q9Y576 335 aa12.32□□□□□ -0.44
SHMT2-211ENST00000554310 CPAMD8Q8IZJ3 1885 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 USP9XQ93008 2570 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-211ENST00000554310 SETXQ7Z333 2677 aaKnown RBP12.31□□□□□ -0.44
SHMT2-211ENST00000554310 SHANK1Q9Y566 2161 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 A0A088AWK7 358 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 TMEM120BA0PK00 339 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 ANKDD1BA6NHY2 528 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 MAGEB17A8MXT2 336 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 C4orf51C9J302 202 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 K7EPI3 171 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 EBAG9O00559 213 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 CHST10O43529 356 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 PRAMEF4O60810 478 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 PRR35P0CG20 571 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 SMIM10L1P0DMW3 83 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 ICAM2P13598 275 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 MTHFD2P13995 350 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 GFAPP14136 432 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 EPORP19235 508 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 ZNF10P21506 573 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-211ENST00000554310 SERPINB1P30740 379 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 SOX11P35716 441 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 HNF4AP41235 474 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 CASP2P42575 452 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 CCT5P48643 541 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 CD97P48960 835 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 MLLT10P55197 1068 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 RHAGQ02094 409 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 PCDH1Q08174 1060 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 CHIT1Q13231 466 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 DOC2AQ14183 400 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 SETDB1Q15047 1291 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 HIST2H2ACQ16777 129 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-211ENST00000554310 TSNAXIP1Q2TAA8 658 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 ADPRMQ3LIE5 342 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 CRB2Q5IJ48 1285 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 PRAMEF9Q5VWM5 478 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 HIST2H2AA3Q6FI13 130 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 ADGRD1Q6QNK2 874 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 LANCL3Q6ZV70 420 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 CPEB2Q7Z5Q1 589 aaKnown RBP12.31□□□□□ -0.44
SHMT2-211ENST00000554310 ATCAYQ86WG3 371 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 EFCAB3Q8N7B9 438 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 Q8NA96 180 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 CPT1CQ8TCG5 803 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 CCT6BQ92526 530 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 UBE2E3Q969T4 207 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 CHMP6Q96FZ7 201 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 SMIM10Q96HG1 83 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 FAR2Q96K12 515 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 IMMP1LQ96LU5 166 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 GPR78Q96P69 363 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 ILKAPQ9H0C8 392 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-211ENST00000554310 RHBGQ9H310 441 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 KLHL31Q9H511 634 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 SSU72Q9NP77 194 aaKnown RBP12.31□□□□□ -0.44
SHMT2-211ENST00000554310 LANCL2Q9NS86 450 aa12.31□□□□□ -0.44
SHMT2-211ENST00000554310 TBK1Q9UHD2 729 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms