RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 RHOJQ9H4E5 214 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 TRIM45Q9H8W5 580 aaPredicted RBP17.56■□□□□ 0.4
CPSF2-203ENST00000554290 NECTIN3Q9NQS3 549 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 MMACHCQ9Y4U1 282 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 A0A088AWK7 358 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 A8MUA0 341 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 ABOP16442 354 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 ZNF24P17028 368 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 ZNF10P21506 573 aaPredicted RBP17.55■□□□□ 0.4
CPSF2-203ENST00000554290 HPDP32754 393 aaPredicted RBP17.55■□□□□ 0.4
CPSF2-203ENST00000554290 TRHRP34981 398 aaPredicted RBP17.55■□□□□ 0.4
CPSF2-203ENST00000554290 PTGER4P35408 488 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 GDF5P43026 501 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 FASTKD3Q14CZ7 662 aaKnown RBP17.55■□□□□ 0.4
CPSF2-203ENST00000554290 ZNF468Q5VIY5 522 aaPredicted RBP17.55■□□□□ 0.4
CPSF2-203ENST00000554290 MYO7BQ6PIF6 2116 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 SLCO4C1Q6ZQN7 724 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 SIAH3Q8IW03 269 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 CEP97Q8IW35 865 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 KLHDC8AQ8IYD2 350 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 ARMC10Q8N2F6 343 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 CCT6BQ92526 530 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 RHBDF1Q96CC6 855 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 SEC16BQ96JE7 1060 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 NPLQ9BXD5 320 aaPredicted RBP17.55■□□□□ 0.4
CPSF2-203ENST00000554290 PITHD1Q9GZP4 211 aaPredicted RBP17.55■□□□□ 0.4
CPSF2-203ENST00000554290 KCNF1Q9H3M0 494 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 GRPEL1Q9HAV7 217 aa17.55■□□□□ 0.4
CPSF2-203ENST00000554290 E7ESA3 106 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 CLDN4O14493 209 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 COX6B1P14854 86 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 SLC6A12P48065 614 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 CLCN2P51788 898 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 HSD17B7P56937 341 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 POU4F1Q01851 419 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 TERF2Q15554 542 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 TGFBIQ15582 683 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.54■□□□□ 0.4
CPSF2-203ENST00000554290 ZBED8Q8IZ13 594 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 TCAIMQ8N3R3 496 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 POGLUT1Q8NBL1 392 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 BBOF1Q8ND07 529 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 B3GNT7Q8NFL0 401 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 ADAMTS18Q8TE60 1221 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 TSPAN17Q96FV3 270 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 NAPGQ99747 312 aaPredicted RBP17.54■□□□□ 0.4
CPSF2-203ENST00000554290 DERL2Q9GZP9 239 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 NT5DC2Q9H857 520 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 CNOT10Q9H9A5 744 aaKnown RBP17.54■□□□□ 0.4
CPSF2-203ENST00000554290 GPRC5BQ9NZH0 403 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 TXNDC16Q9P2K2 825 aa17.54■□□□□ 0.4
CPSF2-203ENST00000554290 MRPS33Q9Y291 106 aaKnown RBP17.54■□□□□ 0.4
CPSF2-203ENST00000554290 KLF13Q9Y2Y9 288 aaPredicted RBP17.54■□□□□ 0.4
CPSF2-203ENST00000554290 LRIT2A6NDA9 550 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 ANKDD1BA6NHY2 528 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 NCF1BA6NI72 391 aaPredicted RBP17.53■□□□□ 0.4
CPSF2-203ENST00000554290 NCF1CA8MVU1 366 aaPredicted RBP17.53■□□□□ 0.4
CPSF2-203ENST00000554290 C4orf51C9J302 202 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 TP73O15350 636 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 ERI3O43414 337 aaKnown RBP17.53■□□□□ 0.4
CPSF2-203ENST00000554290 B3GALT2O43825 422 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 MYO1DO94832 1006 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 NCF1P14598 390 aaPredicted RBP17.53■□□□□ 0.4
CPSF2-203ENST00000554290 ADORA2A-AS1P86434 159 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 CBLBQ13191 982 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 SLBPQ14493 270 aaKnown RBP eCLIP17.53■□□□□ 0.4
CPSF2-203ENST00000554290 C18orf21Q32NC0 220 aaPredicted RBP17.53■□□□□ 0.4
CPSF2-203ENST00000554290 EID3Q8N140 333 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 CPSF7Q8N684 471 aaKnown RBP17.53■□□□□ 0.4
CPSF2-203ENST00000554290 APCDD1LQ8NCL9 501 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 PYROXD1Q8WU10 500 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 CDKL2Q92772 493 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 MS4A6EQ96DS6 147 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 PDLIM2Q96JY6 352 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 CCDC77Q9BR77 488 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 AICDAQ9GZX7 198 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 PNO1Q9NRX1 252 aaKnown RBP17.53■□□□□ 0.4
CPSF2-203ENST00000554290 RNF14Q9UBS8 474 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 FBXW2Q9UKT8 454 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 MEMO1Q9Y316 297 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 SNX24Q9Y343 169 aa17.53■□□□□ 0.4
CPSF2-203ENST00000554290 TRBV11-1A0A0K0K1C0 115 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 SYNDIG1LA6NDD5 238 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 USP27XA6NNY8 438 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 KLRC4-KLRK1H3BQV0 150 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 PRRG2O14669 202 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 CLGNO14967 610 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 CLEC3AO75596 197 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 HNRNPH1P31943 449 aaKnown RBP17.52■□□□□ 0.4
CPSF2-203ENST00000554290 RPL21P46778 160 aaKnown RBP17.52■□□□□ 0.4
CPSF2-203ENST00000554290 SLC13A2Q13183 592 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 RUNX2Q13950 521 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 CDKL4Q5MAI5 379 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 CAPN12Q6ZSI9 719 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 GDF7Q7Z4P5 450 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 ZNF227Q86WZ6 799 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 SCUBE1Q8IWY4 988 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 TMEM156Q8N614 296 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 OR2L5Q8NG80 312 aa17.52■□□□□ 0.4
CPSF2-203ENST00000554290 VMP1Q96GC9 406 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms