RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 RNF130Q86XS8 419 aa19.99■□□□□ 0.79
PRDM4-205ENST00000550376 PACRGLQ8N7B6 248 aa19.99■□□□□ 0.79
PRDM4-205ENST00000550376 OR2L8Q8NGY9 312 aa19.99■□□□□ 0.79
PRDM4-205ENST00000550376 EXOSC8Q96B26 276 aaKnown RBP19.99■□□□□ 0.79
PRDM4-205ENST00000550376 TRIM4Q9C037 500 aa19.99■□□□□ 0.79
PRDM4-205ENST00000550376 GRIP2Q9C0E4 1043 aa19.99■□□□□ 0.79
PRDM4-205ENST00000550376 PCBD2Q9H0N5 130 aa19.99■□□□□ 0.79
PRDM4-205ENST00000550376 ZNF639Q9UID6 485 aa19.99■□□□□ 0.79
PRDM4-205ENST00000550376 SCML1Q9UN30 329 aa19.99■□□□□ 0.79
PRDM4-205ENST00000550376 FAF1Q9UNN5 650 aaPredicted RBP19.99■□□□□ 0.79
PRDM4-205ENST00000550376 AP3M1Q9Y2T2 418 aa19.99■□□□□ 0.79
PRDM4-205ENST00000550376 GPR37L1O60883 481 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 TNFAIP8O95379 198 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 TFAP2AP05549 437 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 TNFRSF1BP20333 461 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 HNRNPA2B1P22626 353 aaKnown RBP19.98■□□□□ 0.79
PRDM4-205ENST00000550376 CXCR2P25025 360 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 BMP8BP34820 402 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 SNRPNP63162 240 aaKnown RBP19.98■□□□□ 0.79
PRDM4-205ENST00000550376 CPZQ66K79 652 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 ZDHHC13Q8IUH4 622 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 ZDHHC21Q8IVQ6 265 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 DEFB119Q8N690 84 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 SCARF2Q96GP6 870 aaPredicted RBP19.98■□□□□ 0.79
PRDM4-205ENST00000550376 WDR92Q96MX6 357 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 PHF12Q96QT6 1004 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 FBRSQ9HAH7 460 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 SIRT5Q9NXA8 310 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 DNAJB9Q9UBS3 223 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 MMP17Q9ULZ9 603 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 NDUFS4O43181 175 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 E2F6O75461 281 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 GCM2O75603 506 aaPredicted RBP19.98■□□□□ 0.79
PRDM4-205ENST00000550376 PRSS23O95084 383 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 EOGTQ5NDL2 527 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 TRIM73Q86UV7 250 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.98■□□□□ 0.79
PRDM4-205ENST00000550376 ZNF786Q8N393 782 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 SYNPOQ8N3V7 929 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 METTL25Q8N6Q8 603 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 OR2L3Q8NG85 312 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 OR13H1Q8NG92 308 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 LCN9Q8WX39 176 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 CHST8Q9H2A9 424 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 ATAD3AQ9NVI7 634 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 WDR87Q6ZQQ6 2873 aa19.98■□□□□ 0.79
PRDM4-205ENST00000550376 CLPTM1O96005 669 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 VLDLRP98155 873 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 C10orf62Q5T681 223 aaPredicted RBP19.97■□□□□ 0.79
PRDM4-205ENST00000550376 ZNF793Q6ZN11 406 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 R3HCC1LQ7Z5L2 792 aaKnown RBP19.97■□□□□ 0.79
PRDM4-205ENST00000550376 DHRSXQ8N5I4 330 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 CREB3L4Q8TEY5 395 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 AHSPQ9NZD4 102 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 MUC3AQ02505 3323 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 MYO1GB0I1T2 1018 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 SEMA4FO95754 770 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 ALPLP05186 524 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 CELA2BP08218 269 aaPredicted RBP19.97■□□□□ 0.79
PRDM4-205ENST00000550376 CHI3L1P36222 383 aaPredicted RBP19.97■□□□□ 0.79
PRDM4-205ENST00000550376 SLC19A1P41440 591 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 PXNP49023 591 aaPredicted RBP19.97■□□□□ 0.79
PRDM4-205ENST00000550376 MAP7Q14244 749 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 COL19A1Q14993 1142 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 ALG11Q2TAA5 492 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 HSH2DQ96JZ2 352 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 CXorf36Q9H7Y0 433 aa19.97■□□□□ 0.79
PRDM4-205ENST00000550376 KLHL33A6NCF5 533 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 LRIT2A6NDA9 550 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 LRRC72A6NJI9 287 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 BTN3A3O00478 584 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 PRICKLE3O43900 615 aaPredicted RBP19.96■□□□□ 0.79
PRDM4-205ENST00000550376 HTR1BP28222 390 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 POLR2IP36954 125 aaKnown RBP19.96■□□□□ 0.79
PRDM4-205ENST00000550376 RAB8AP61006 207 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 HSPB3Q12988 150 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 LIN52Q52LA3 116 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 MVB12BQ9H7P6 319 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 TRPV5Q9NQA5 729 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 TAS2R9Q9NYW1 312 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 ZNF282Q9UDV7 671 aaPredicted RBP19.96■□□□□ 0.79
PRDM4-205ENST00000550376 VPS13AQ96RL7 3174 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 CAPN5O15484 640 aaPredicted RBP19.96■□□□□ 0.79
PRDM4-205ENST00000550376 MBTPS2O43462 519 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 YAP1P46937 504 aaKnown RBP19.96■□□□□ 0.79
PRDM4-205ENST00000550376 SRP54P61011 504 aaKnown RBP19.96■□□□□ 0.79
PRDM4-205ENST00000550376 AMIGO1Q86WK6 493 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 ZC3H7AQ8IWR0 971 aaKnown RBP19.96■□□□□ 0.79
PRDM4-205ENST00000550376 SLC22A18ASQ8N1D0 253 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 OR52E4Q8NGH9 312 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 OR8K5Q8NH50 307 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 TOE1Q96GM8 510 aaKnown RBP19.96■□□□□ 0.79
PRDM4-205ENST00000550376 KLF15Q9UIH9 416 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 SCN3AQ9NY46 2000 aa19.96■□□□□ 0.79
PRDM4-205ENST00000550376 PRAMEF10O60809 474 aa19.95■□□□□ 0.78
PRDM4-205ENST00000550376 PCSK2P16519 638 aa19.95■□□□□ 0.78
PRDM4-205ENST00000550376 DCTP40126 519 aa19.95■□□□□ 0.78
PRDM4-205ENST00000550376 DAG1Q14118 895 aa19.95■□□□□ 0.78
PRDM4-205ENST00000550376 CEP68Q76N32 757 aa19.95■□□□□ 0.78
PRDM4-205ENST00000550376 RGMAQ96B86 450 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms