RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 HYLS1Q96M11 299 aa11.65□□□□□ -0.55
VDR-208ENST00000550325 MIXL1Q9H2W2 232 aa11.65□□□□□ -0.55
VDR-208ENST00000550325 NIPAL2Q9H841 368 aa11.65□□□□□ -0.55
VDR-208ENST00000550325 B3GNT2Q9NY97 397 aa11.65□□□□□ -0.55
VDR-208ENST00000550325 NDUFAF4Q9P032 175 aa11.65□□□□□ -0.55
VDR-208ENST00000550325 ZNF624Q9P2J8 865 aaPredicted RBP11.65□□□□□ -0.55
VDR-208ENST00000550325 SLC35F4A4IF30 521 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 GADD45GO95257 159 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 SLC25A27O95847 323 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 SMIM10L2AP0DMW4 78 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 SMIM10L2BP0DMW5 78 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 LAMP1P11279 417 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ODC1P11926 461 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 KCNJ10P78508 379 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ACVR1Q04771 509 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 FCN2Q15485 313 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 TAF1AQ15573 450 aaPredicted RBP11.64□□□□□ -0.55
VDR-208ENST00000550325 ATAT1Q5SQI0 421 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 UBXN11Q5T124 520 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 LRIF1Q5T3J3 769 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 BHLHB9Q6PI77 547 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 LUZP2Q86TE4 346 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 SERPINA11Q86U17 422 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 TCEANCQ8N8B7 351 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 GDPD1Q8N9F7 314 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 LKAAEAR1Q8TD35 194 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 DNAJA4Q8WW22 397 aaPredicted RBP11.64□□□□□ -0.55
VDR-208ENST00000550325 REPS1Q96D71 796 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ZBED6CLQ96FA7 236 aaPredicted RBP11.64□□□□□ -0.55
VDR-208ENST00000550325 NELL2Q99435 816 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 DOHHQ9BU89 302 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ATG10Q9H0Y0 220 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 GSAPA4D1B5 854 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 CSTF2P33240 577 aaKnown RBP eCLIP11.64□□□□□ -0.55
VDR-208ENST00000550325 SOAT1P35610 550 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 CSTF1Q05048 431 aaKnown RBP11.64□□□□□ -0.55
VDR-208ENST00000550325 SERINC3Q13530 473 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ZSWIM7Q19AV6 140 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.64□□□□□ -0.55
VDR-208ENST00000550325 TOR1AIP1Q5JTV8 583 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 GARNL3Q5VVW2 1013 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 KCTD20Q7Z5Y7 419 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ZBTB44Q8NCP5 570 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 OR5AK3PQ8NH89 298 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ADGRE3Q9BY15 652 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 GPBP1L1Q9HC44 474 aaPredicted RBP11.64□□□□□ -0.55
VDR-208ENST00000550325 NMRK2Q9NPI5 230 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 TVP23BQ9NYZ1 205 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 STOML2Q9UJZ1 356 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 CLEC4AQ9UMR7 237 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 COL4A5P29400 1685 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 A0A0G2JMZ2 1700 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 LRRC37A2A6NM11 1700 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 TEX51A0A1B0GUA7 166 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ZNF670-ZNF695F2Z2N8 137 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 PCDH7O60245 1069 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 TPST2O60704 377 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 RFPL3O75679 317 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 TPPPO94811 219 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 TRBC1P01850 177 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 HOXB6P17509 224 aaKnown RBP11.64□□□□□ -0.55
VDR-208ENST00000550325 HLA-DMAP28067 261 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 GRK4P32298 578 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 C2orf80Q0P641 193 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 NCF4Q15080 339 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ZBTB37Q5TC79 503 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 FAM171BQ6P995 826 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ANKS3Q6ZW76 656 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ZNF680Q8NEM1 530 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 KLHL6Q8WZ60 621 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 PEX13Q92968 403 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 ASB8Q9H765 288 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 TBC1D17Q9HA65 648 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 C12orf10Q9HB07 376 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 PAK6Q9NQU5 681 aaPredicted RBP11.64□□□□□ -0.55
VDR-208ENST00000550325 NCKAP1Q9Y2A7 1128 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 MAP4K5Q9Y4K4 846 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 PCDHB9Q9Y5E1 797 aa11.64□□□□□ -0.55
VDR-208ENST00000550325 GNG14A0A1W2PPG7 69 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 F8W810 466 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 TLR4O00206 839 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 SCG5P05408 212 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 SYPP08247 313 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 ALPIP09923 528 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 ETFAP13804 333 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 MAPK1P28482 360 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 HOXC13P31276 330 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 GSTM5P46439 218 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 BCL2L1Q07817 233 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 FAM122CQ6P4D5 195 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 DCLRE1CQ96SD1 692 aaKnown RBP11.63□□□□□ -0.55
VDR-208ENST00000550325 TXNL4BQ9NX01 149 aaKnown RBP11.63□□□□□ -0.55
VDR-208ENST00000550325 RBPJLQ9UBG7 517 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 EIF3KQ9UBQ5 218 aaKnown RBP11.63□□□□□ -0.55
VDR-208ENST00000550325 DHRS7Q9Y394 339 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 BNIP3LO60238 219 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 OR10H3O60404 316 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 IL32P24001 234 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 MICAQ29983 383 aa11.63□□□□□ -0.55
VDR-208ENST00000550325 IFI44LQ53G44 452 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms