RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 PEX12O00623 359 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 TYROBPO43914 113 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 DNAJB6O75190 326 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 HEXBP07686 556 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 MYZAPP0CAP1 466 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 NEK2P51955 445 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 PKNOX1P55347 436 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 RPS13P62277 151 aaKnown RBP18.29■□□□□ 0.52
DDX54-207ENST00000550016 OLR1P78380 273 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 LCP2Q13094 533 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 ATP1A4Q13733 1029 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 CASP8Q14790 479 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 PCLAFQ15004 111 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 LINC00303Q3SY05 128 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 CFAP157Q5JU67 520 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 KHDRBS2Q5VWX1 349 aaKnown RBP18.29■□□□□ 0.52
DDX54-207ENST00000550016 LIPMQ5VYY2 423 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 FRG2Q64ET8 278 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 GPRIN3Q6ZVF9 776 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 C10orf107Q8IVU9 208 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 ZBTB9Q96C00 473 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 MTFMTQ96DP5 389 aaKnown RBP18.29■□□□□ 0.52
DDX54-207ENST00000550016 WBP1Q96G27 269 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 PEX11GQ96HA9 241 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 KCNC2Q96PR1 638 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 FRG2BQ96QU4 278 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 OR1F2PQ96R84 312 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 UBL7Q96S82 380 aaPredicted RBP18.29■□□□□ 0.52
DDX54-207ENST00000550016 TBCDQ9BTW9 1192 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 NPLQ9BXD5 320 aaPredicted RBP18.29■□□□□ 0.52
DDX54-207ENST00000550016 ROGDIQ9GZN7 287 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 OR51B5Q9H339 312 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 SSU72Q9NP77 194 aaKnown RBP18.29■□□□□ 0.52
DDX54-207ENST00000550016 PRDM7Q9NQW5 492 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 ZNF225Q9UK10 706 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 MKL2Q9ULH7 1088 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 PPT2Q9UMR5 302 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 IGSF10Q6WRI0 2623 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 B3GALT2O43825 422 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 TRIM13O60858 407 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 SH3BGRLO75368 114 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 JRKO75564 520 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 OR4F21O95013 312 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 RNH1P13489 461 aaKnown RBP18.28■□□□□ 0.52
DDX54-207ENST00000550016 MTTPP55157 894 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 ASPHQ12797 758 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 IFT88Q13099 833 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 MED25Q71SY5 747 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 UBE3DQ7Z6J8 389 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 APLFQ8IW19 511 aaPredicted RBP18.28■□□□□ 0.52
DDX54-207ENST00000550016 SHISA5Q8N114 240 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 RGMAQ96B86 450 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 TBC1D20Q96BZ9 403 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 VPS50Q96JG6 964 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 SERINC2Q96SA4 455 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 ARHGAP9Q9BRR9 750 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 CENPKQ9BS16 269 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 STMN4Q9H169 189 aaPredicted RBP18.28■□□□□ 0.52
DDX54-207ENST00000550016 COPS7BQ9H9Q2 264 aaPredicted RBP18.28■□□□□ 0.52
DDX54-207ENST00000550016 ARGLU1Q9NWB6 273 aaPredicted RBP18.28■□□□□ 0.52
DDX54-207ENST00000550016 SNX6Q9UNH7 406 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 ACTL7BQ9Y614 415 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 HS3ST3B1Q9Y662 390 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 FAM208BQ5VWN6 2430 aa18.28■□□□□ 0.52
DDX54-207ENST00000550016 CHD6Q8TD26 2715 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 AGPSO00116 658 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 SOCS6O14544 535 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 PCDH17O14917 1159 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 CYC1P08574 325 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 ALDH3A1P30838 453 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 ARFIP1P53367 373 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 RRADP55042 308 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 CUL3Q13618 768 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 RUNX2Q13950 521 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 AP5B1Q2VPB7 878 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 MFSD4BQ5TF39 518 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 KIRREL2Q6UWL6 708 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 FRMD7Q6ZUT3 714 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 CA13Q8N1Q1 262 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 TMEM102Q8N9M5 508 aaPredicted RBP18.27■□□□□ 0.52
DDX54-207ENST00000550016 SLC29A3Q9BZD2 475 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 VN1R1Q9GZP7 353 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 ELOVL6Q9H5J4 265 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 P4HTMQ9NXG6 502 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 ZFYVE26Q68DK2 2539 aa18.27■□□□□ 0.52
DDX54-207ENST00000550016 GOLGA6L10A6NI86 522 aa18.26■□□□□ 0.51
DDX54-207ENST00000550016 ARGFXA6NJG6 315 aa18.26■□□□□ 0.51
DDX54-207ENST00000550016 H3BQF6 201 aa18.26■□□□□ 0.51
DDX54-207ENST00000550016 PSMD12O00232 456 aaPredicted RBP18.26■□□□□ 0.51
DDX54-207ENST00000550016 SAP18O00422 153 aaKnown RBP18.26■□□□□ 0.51
DDX54-207ENST00000550016 ESRRBO95718 433 aa18.26■□□□□ 0.51
DDX54-207ENST00000550016 ENO1P06733 434 aaKnown RBP18.26■□□□□ 0.51
DDX54-207ENST00000550016 FHP07954 510 aa18.26■□□□□ 0.51
DDX54-207ENST00000550016 ATP5A1P25705 553 aaKnown RBP18.26■□□□□ 0.51
DDX54-207ENST00000550016 RAP1GDS1P52306 607 aa18.26■□□□□ 0.51
DDX54-207ENST00000550016 TUBB8Q3ZCM7 444 aa18.26■□□□□ 0.51
DDX54-207ENST00000550016 MINDY4Q4G0A6 757 aa18.26■□□□□ 0.51
DDX54-207ENST00000550016 SGO1Q5FBB7 561 aa18.26■□□□□ 0.51
DDX54-207ENST00000550016 OR4C11Q6IEV9 310 aa18.26■□□□□ 0.51
DDX54-207ENST00000550016 CDYL2Q8N8U2 506 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms