RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 PPP1R3AQ16821 1122 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 SYT16Q17RD7 645 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 TUBB8Q3ZCM7 444 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 FAM45BPQ6NSW5 357 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 PAOXQ6QHF9 649 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 LCTLQ6UWM7 567 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 Q6ZS92 163 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 PRSS41Q7RTY9 318 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 ZC3HC1Q86WB0 502 aaKnown RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 ZC3H7AQ8IWR0 971 aaKnown RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 NKAPQ8N5F7 415 aaKnown RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 FBXO36Q8NEA4 188 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 ABHD11Q8NFV4 315 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 OR4K1Q8NGD4 311 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 OR56A3Q8NH54 315 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 GABPB2Q8TAK5 448 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 FAM45AQ8TCE6 357 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 PSMF1Q92530 271 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 RERGQ96A58 199 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 MIEF2Q96C03 454 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 C8orf44Q96CB5 159 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 FBXL8Q96CD0 374 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 C19orf60Q96EN9 201 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 KRT12Q99456 494 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 CENPOQ9BU64 300 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 CRB3Q9BUF7 120 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 YIPF2Q9BWQ6 316 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 TRIM31Q9BZY9 425 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 DRC3Q9H069 523 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 PCBD2Q9H0N5 130 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 ATG10Q9H0Y0 220 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 MKKSQ9NPJ1 570 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 SMYD2Q9NRG4 433 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 ABCF3Q9NUQ8 709 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 C14orf105Q9NVL8 296 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 UTP6Q9NYH9 597 aaKnown RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 C3orf18Q9UK00 162 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 CDC14AQ9UNH5 594 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 B3GNT3Q9Y2A9 372 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 SNX24Q9Y343 169 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 CPAMD8Q8IZJ3 1885 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 CELSR1Q9NYQ6 3014 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 IGHV1-45A0A0A0MS14 117 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 LOC100289279A0A1B0GTE1 492 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 A0A1W2PRQ8 180 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 FEZF1A0PJY2 475 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 CTAGE15A4D2H0 777 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 CXorf49A8MYA2 514 aaPredicted RBP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 IDSB3KWA1 339 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 TCP11X1B4DZS4 312 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 H0YIG0 161 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 PRPF4O43172 522 aaKnown RBP eCLIP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 RAD51CO43502 376 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 KLHL41O60662 606 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 IPO13O94829 963 aaKnown RBP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 BMP10O95393 424 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 NSA2O95478 260 aaKnown RBP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 STATHP02808 62 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 F13BP05160 661 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ALPPP05187 535 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ENO2P09104 434 aaPredicted RBP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 CDH1P12830 882 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 GNLYP22749 145 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 CCND1P24385 295 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ITGA3P26006 1051 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 PAFAH1B1P43034 410 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 EMP2P54851 167 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 MAT1AQ00266 395 aaKnown RBP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 MGAT5Q09328 741 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ZNF460Q14592 562 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 PCOLCEQ15113 449 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 FAM209AQ5JX71 171 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 THEMIS2Q5TEJ8 643 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 DUPD1Q68J44 220 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 TMEM205Q6UW68 189 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 NDUFAF7Q7L592 441 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ADCK2Q7Z695 626 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 CTAGE6Q86UF2 777 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 CUZD1Q86UP6 607 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 SLC26A11Q86WA9 606 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 C17orf64Q86WR6 236 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 PDSS2Q86YH6 399 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 CEP97Q8IW35 865 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 PRSS58Q8IYP2 241 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 C17orf53Q8N3J3 647 aaPredicted RBP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 FAM26EQ8N5C1 309 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 AMER2Q8N7J2 671 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 MFSD9Q8NBP5 474 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 KCT2Q8NC54 265 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 SPATA4Q8NEY3 305 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 OR9A4Q8NGU2 314 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 PPP4R1Q8TF05 950 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ANKRD49Q8WVL7 239 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ANKRD7Q92527 254 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 PYCR2Q96C36 320 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 SNRNP40Q96DI7 357 aaKnown RBP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 MMABQ96EY8 250 aaPredicted RBP6.28□□□□□ -1.4
TMEM116-208ENST00000549537 MACROD1Q9BQ69 325 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 ERP44Q9BS26 406 aa6.28□□□□□ -1.4
TMEM116-208ENST00000549537 LHPPQ9H008 270 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms