RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ASPRV1Q53RT3 343 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 ARMCX4Q5H9R4 360 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 IL23RQ5VWK5 629 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 OR4A47Q6IF82 309 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 KLHL10Q6JEL2 608 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 FAM122CQ6P4D5 195 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 LINGO4Q6UY18 593 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 Q6ZTK2 550 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 TMEM26Q6ZUK4 368 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CTAGE6Q86UF2 777 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 PTOV1Q86YD1 416 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CTAGE4Q8IX94 777 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CDH26Q8IXH8 852 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CERS5Q8N5B7 392 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 RDM1Q8NG50 284 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 OR13J1Q8NGT2 312 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 RNF139Q8WU17 664 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 MTBPQ96DY7 904 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 PCYT2Q99447 389 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 VN1R1Q9GZP7 353 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 ZMYND12Q9H0C1 365 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 RIMS4Q9H426 269 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-210ENST00000547654 GORASP2Q9H8Y8 452 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 PHPT1Q9NRX4 125 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-210ENST00000547654 SMPD3Q9NY59 655 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-210ENST00000547654 IL20RAQ9UHF4 553 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 ASB3Q9Y575 518 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 NCAPD2Q15021 1401 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 PRAG1Q86YV5 1406 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 RAPGEF2Q9Y4G8 1499 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 LRP6O75581 1613 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 HECW1Q76N89 1606 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 BIVM-ERCC5R4GMW8 1640 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 DISP1Q96F81 1524 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ROBO1Q9Y6N7 1651 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 A0A0U1RRA0 63 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 A0A1B0GVT2 93 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ZSCAN5CA6NGD5 496 aaPredicted RBP3.91□□□□□ -1.78
SCAF11-210ENST00000547654 SERINC4A6NH21 518 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 E5RGE8 158 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 SLC22A2O15244 555 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 NUDT21O43809 227 aaKnown RBP3.91□□□□□ -1.78
SCAF11-210ENST00000547654 TOM1O60784 492 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 RFPL2O75678 378 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 STBD1O95210 358 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 HOXC6P09630 235 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ACP2P11117 423 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ZNF12P17014 697 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 SFTPDP35247 375 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 TMPOP42166 694 aaKnown RBP3.91□□□□□ -1.78
SCAF11-210ENST00000547654 GLIPR1P48060 266 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 TNFSF10P50591 281 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 VAMP7P51809 220 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ART1P52961 327 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 MLLT10P55197 1068 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ROR2Q01974 943 aaKnown RBP3.91□□□□□ -1.78
SCAF11-210ENST00000547654 DMPKQ09013 629 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 TRAF3Q13114 568 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 DDX39BQ13838 428 aaKnown RBP3.91□□□□□ -1.78
SCAF11-210ENST00000547654 SCN5AQ14524 2016 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 HNF4GQ14541 408 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 PDIA5Q14554 519 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ZMYND11Q15326 602 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 PDK4Q16654 411 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 IMMTQ16891 758 aaKnown RBP3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ZNF770Q6IQ21 691 aaPredicted RBP3.91□□□□□ -1.78
SCAF11-210ENST00000547654 CTR9Q6PD62 1173 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 CES3Q6UWW8 571 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 AKNAQ7Z591 1439 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 BCORP1Q8N888 145 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 FADS6Q8N9I5 356 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 OR56B2PQ8NGI1 322 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 OR10Q1Q8NGQ4 319 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 OR13C2Q8NGS9 318 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 LMO3Q8TAP4 145 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 LGALS12Q96DT0 336 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 MAGED4Q96JG8 741 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 GUCD1Q96NT3 240 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 OR1F2PQ96R84 312 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 PCDHB18PQ96TA0 734 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 CCT7Q99832 543 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ZSCAN5AQ9BUG6 496 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 TRAF4Q9BUZ4 470 aaPredicted RBP3.91□□□□□ -1.78
SCAF11-210ENST00000547654 WWTR1Q9GZV5 400 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 SDCBP2Q9H190 292 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 NCOR1P1Q9H4R4 102 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ZDHHC6Q9H6R6 413 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 TM9SF3Q9HD45 589 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 YAE1D1Q9NRH1 226 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 OLFML3Q9NRN5 406 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 TCP11L1Q9NUJ3 509 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 ACOXLQ9NUZ1 547 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 GTSE1Q9NYZ3 720 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 C1RLQ9NZP8 487 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 SLC12A6Q9UHW9 1150 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 TEKT2Q9UIF3 430 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 DAPK2Q9UIK4 370 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 FZD10Q9ULW2 581 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 NSG2Q9Y328 171 aa3.91□□□□□ -1.78
SCAF11-210ENST00000547654 CEP170BQ9Y4F5 1589 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms