RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ANXA8L1Q5VT79 327 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 PRAMEF9Q5VWM5 478 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 SERINC5Q86VE9 423 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 NXPE1Q8N323 547 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 GDPD1Q8N9F7 314 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 FAM46DQ8NEK8 389 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 OR9Q1Q8NGQ5 310 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 OR6K2Q8NGY2 324 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 BTN2A2Q8WVV5 523 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 KLHL6Q8WZ60 621 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 RNF31Q96EP0 1072 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 MAGEB10Q96LZ2 347 aaPredicted RBP13.63□□□□□ -0.23
SRP54-202ENST00000546080 SLC12A9Q9BXP2 914 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 CLEC2DQ9UHP7 191 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 GABRR3A8MPY1 467 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 ENTPD6O75354 484 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 C8GP07360 202 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 CBLP22681 906 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 HLA-DMAP28067 261 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 IFNA8P32881 189 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 SPAM1P38567 509 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 NSG1P42857 185 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 SCARB2Q14108 478 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 GANABQ14697 944 aaKnown RBP13.62□□□□□ -0.23
SRP54-202ENST00000546080 GPR33Q49SQ1 333 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 PYDC2Q56P42 97 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 DGKKQ5KSL6 1271 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 CXorf57Q6NSI4 855 aaKnown RBP13.62□□□□□ -0.23
SRP54-202ENST00000546080 KLHL17Q6TDP4 642 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 GLB1LQ6UWU2 654 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 CCDC149Q6ZUS6 474 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 C11orf74Q86VG3 221 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 PLCZ1Q86YW0 608 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 UBE2J2Q8N2K1 259 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 YIPF7Q8N8F6 280 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 SNAPC3Q92966 411 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 DIRAS2Q96HU8 199 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 IL4I1Q96RQ9 567 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 MTERF1Q99551 399 aaKnown RBP13.62□□□□□ -0.23
SRP54-202ENST00000546080 PIP5K1AQ99755 562 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 MND1Q9BWT6 205 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 TM6SF2Q9BZW4 377 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 CRISPLD1Q9H336 500 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 C11orf16Q9NQ32 467 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 SATB2Q9UPW6 733 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 A0A0X1KG70 313 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 MTMR11A4FU01 709 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 PRAMEF25A6NGN4 478 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 ZSCAN5BA6NJL1 495 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 WWP2O00308 870 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 PDE9AO76083 593 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 FHP07954 510 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 TSPAN19P0C672 248 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 CCNYL3P0C7X3 344 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 CORO1AP31146 461 aaKnown RBP13.62□□□□□ -0.23
SRP54-202ENST00000546080 CCR7P32248 378 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 KIR2DL3P43628 341 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 OR3A3P47888 321 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 HOXC5Q00444 222 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 IRF8Q02556 426 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 WDR45BQ5MNZ6 344 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 COX20Q5RI15 118 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 GCNT6Q5T4J0 391 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 MEDAGQ5VYS4 303 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 FRMPD2BQ6IN97 320 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 CXCL17Q6UXB2 119 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 CCDC28AQ8IWP9 274 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 TAGAPQ8N103 731 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 FAM109AQ8N4B1 249 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 OR5H6Q8NGV6 325 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 NFKBIDQ8NI38 313 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 GEMIN6Q8WXD5 167 aaKnown RBP13.62□□□□□ -0.23
SRP54-202ENST00000546080 TTC9Q92623 222 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 SLC25A46Q96AG3 418 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 REPS1Q96D71 796 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 TMEM80Q96HE8 168 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 PARK7Q99497 189 aaKnown RBP13.62□□□□□ -0.23
SRP54-202ENST00000546080 POLR2J2Q9GZM3 115 aaKnown RBP13.62□□□□□ -0.23
SRP54-202ENST00000546080 MKRN2Q9H000 416 aaKnown RBP13.62□□□□□ -0.23
SRP54-202ENST00000546080 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.62□□□□□ -0.23
SRP54-202ENST00000546080 MIXL1Q9H2W2 232 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 FAM83DQ9H4H8 585 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 SLC25A19Q9HC21 320 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 NMRK2Q9NPI5 230 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 ACER3Q9NUN7 267 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 NDUFB11Q9NX14 153 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 KLHL21Q9UJP4 597 aa13.62□□□□□ -0.23
SRP54-202ENST00000546080 A0A1W2PQL4 384 aaPredicted RBP13.61□□□□□ -0.23
SRP54-202ENST00000546080 FADS2P1A8MWK0 482 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 TMEM189-UBE2V1I3L0A0 370 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 TLR4O00206 839 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 AGRPO00253 132 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 GJB5O95377 273 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 ITGB7P26010 798 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 PKLRP30613 574 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 XCR1P46094 333 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 ASMTP46597 345 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 DGKEP52429 567 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 HSPA14Q0VDF9 509 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 HNRNPA0Q13151 305 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms