RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PHLDA1Q8WV24 401 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-222ENST00000545308 TAF4BQ92750 862 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 EEF2KMTQ96G04 330 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 C17orf62Q9BQA9 187 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 KRT23Q9C075 422 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 MIS12Q9H081 205 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 UBQLN3Q9H347 655 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 MAGEF1Q9HAY2 307 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 SDR39U1Q9NRG7 319 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-222ENST00000545308 GPR173Q9NS66 373 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 PDRG1Q9NUG6 133 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 EPS15L1Q9UBC2 864 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 POU2F3Q9UKI9 436 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 SLC7A7Q9UM01 511 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 STUB1Q9UNE7 303 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 AGTPBP1Q9UPW5 1226 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 NIP7Q9Y221 180 aaKnown RBP eCLIP3.73□□□□□ -1.816e-44■■■■□ 24.8
SNHG1-222ENST00000545308 EXOC6BQ9Y2D4 811 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 ADAMTS7Q9UKP4 1686 aa3.73□□□□□ -1.81
SNHG1-222ENST00000545308 PFASO15067 1338 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 C2orf92A0A1B0GVN3 265 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ANKRD61A6NGH8 418 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 C2orf81A6NN90 581 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ERVV-1B6SEH8 477 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 XPNPEP2O43895 674 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ZBTB11O95625 1053 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 IGHV4-39P01824 125 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 CD59P13987 128 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 CDH3P22223 829 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 RPA1P27694 616 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 CDC25AP30304 524 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 TNNT2P45379 298 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 CAMLGP49069 296 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 GPC3P51654 580 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 HSD17B7P56937 341 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 NANOS2P60321 138 aaKnown RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 GCNT1Q02742 428 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 SLC39A6Q13433 755 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 CCNYL2Q5T2Q4 361 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 AGAP6Q5VW22 663 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ZNF790Q6PG37 636 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 MFSD7Q6UXD7 560 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 C9orf47Q6ZRZ4 202 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 KCTD8Q6ZWB6 473 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 CREB3L2Q70SY1 520 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ARMC9Q7Z3E5 817 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 MIER3Q7Z3K6 550 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 LAX1Q8IWV1 398 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ELMOD2Q8IZ81 293 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ZNF843Q8N446 348 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 CCDC63Q8NA47 563 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 CNNM3Q8NE01 707 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 OR52N5Q8NH56 324 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 EXOC6Q8TAG9 804 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 SLC26A7Q8TE54 656 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 NEUROG1Q92886 237 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 TSACCQ96A04 125 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 MRPL38Q96DV4 380 aaKnown RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 SLC47A1Q96FL8 570 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 RBM41Q96IZ5 413 aaKnown RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 LYZL4Q96KX0 146 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 TSSK2Q96PF2 358 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 TSGA13Q96PP4 275 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 FAM111AQ96PZ2 611 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 PKP2Q99959 881 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 DDX50Q9BQ39 737 aaKnown RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 NTPCRQ9BSD7 190 aaKnown RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ZNF577Q9BSK1 485 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 URM1Q9BTM9 101 aaKnown RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 IDI2Q9BXS1 227 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ABCG4Q9H172 646 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 CARD9Q9H257 536 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 LIN28AQ9H9Z2 209 aaKnown RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 KCNMB3Q9NPA1 279 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ACTR3BQ9P1U1 418 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 SPASTQ9UBP0 616 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 HOOK1Q9UJC3 728 aaKnown RBP3.72□□□□□ -1.81
SNHG1-222ENST00000545308 ZNF510Q9Y2H8 683 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 RIPK3Q9Y572 518 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 NPC1L1Q9UHC9 1359 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 NUP98P52948 1817 aa3.72□□□□□ -1.81
SNHG1-222ENST00000545308 CEP290O15078 2479 aa3.71□□□□□ -1.81
SNHG1-222ENST00000545308 BCORQ6W2J9 1755 aa3.71□□□□□ -1.81
SNHG1-222ENST00000545308 TRAV18A0A075B6X5 111 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 IGLV5-45A0A087WSX0 123 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TRBV2A0A0J9YWF9 115 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 LOC101059948A0A1B0GTJ6 334 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 A0A1W2PN81 502 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 MAGEB16A2A368 324 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 RGSL1A5PLK6 1076 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 C2CD4DB7Z1M9 353 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 NPIPA3F8WFD2 350 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 H3BMM5 538 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TULP2O00295 520 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 PIGNO95427 931 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 PPP1R3DO95685 299 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 APOHP02749 345 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-222ENST00000545308 SKILP12757 684 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 DAOP14920 347 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 ETS1P14921 441 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms