RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 ZC4H2Q9NQZ6 224 aa4.44□□□□□ -1.7
CNGA1-209ENST00000544810 CRIM1Q9NZV1 1036 aa4.44□□□□□ -1.7
CNGA1-209ENST00000544810 FRRS1LQ9P0K9 344 aa4.44□□□□□ -1.7
CNGA1-209ENST00000544810 TEKT2Q9UIF3 430 aa4.44□□□□□ -1.7
CNGA1-209ENST00000544810 TMPRSS11EQ9UL52 423 aa4.44□□□□□ -1.7
CNGA1-209ENST00000544810 EDARQ9UNE0 448 aa4.44□□□□□ -1.7
CNGA1-209ENST00000544810 CACNA1EQ15878 2313 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 COL5A1P20908 1838 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 A0A0J9YYE9 177 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 LINC00854A0A1B0GVQ3 168 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 E9PAM4 449 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 DSCR3O14972 297 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 AIREO43918 545 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 VPS4BO75351 444 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 AGR2O95994 175 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ASS1P00966 412 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PIGRP01833 764 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 CKMP06732 381 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 CD3EP07766 207 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 IFNGR1P15260 489 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 HLA-FP30511 346 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 HOXC12P31275 282 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ATICP31939 592 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 EIF2S3P41091 472 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 CTSKP43235 329 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 RFX2P48378 723 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 LIG4P49917 911 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ARPP19P56211 112 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 RBP5P82980 135 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 IRF9Q00978 393 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 KCNAB2Q13303 367 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 GTF2H3Q13889 308 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PRPSAP1Q14558 356 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 TSC22D1Q15714 1073 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 TBCEQ15813 527 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 UGP2Q16851 508 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PTPN20Q4JDL3 420 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ARMCX4Q5H9R4 360 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 MLIPQ5VWP3 458 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 TPGS2Q68CL5 300 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 KDM4DQ6B0I6 523 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 BRAT1Q6PJG6 821 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PLEKHM3Q6ZWE6 761 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 EFL1Q7Z2Z2 1120 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 NRARPQ7Z6K4 114 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SYTL1Q8IYJ3 562 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SLC22A15Q8IZD6 547 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 RNF149Q8NC42 400 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 MDGA1Q8NFP4 955 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 RDM1Q8NG50 284 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 OR4M2Q8NGB6 313 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 UFD1Q92890 307 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PTP4A1Q93096 173 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 TMEM143Q96AN5 459 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 C18orf25Q96B23 403 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 WBP1Q96G27 269 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ZC3HAV1LQ96H79 300 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 VPS39Q96JC1 886 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 GPR137Q96N19 417 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SLC30A2Q9BRI3 323 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 UCK2Q9BZX2 261 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SPNS1Q9H2V7 528 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 RHOJQ9H4E5 214 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 FAM83DQ9H4H8 585 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 TCF7L1Q9HCS4 588 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 RANGRFQ9HD47 186 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SLC52A3Q9NQ40 469 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 FAM49BQ9NUQ9 324 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 KIF17Q9P2E2 1029 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 KLK4Q9Y5K2 254 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 FKBP7Q9Y680 259 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PDCD11Q14690 1871 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 CFAP46Q8IYW2 2715 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 VWA8A3KMH1 1905 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 A0A087X1B8 175 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 A0A1W2PP18 115 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 OTOL1A6NHN0 477 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ERI2A8K979 691 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 WASH4PA8MWX3 477 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PRMT5O14744 637 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PROM1O43490 865 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SLC28A2O43868 658 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 LRIG2O94898 1065 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 RPLP0P05388 317 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 FGF4P08620 206 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ADORA3P0DMS8 318 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ARF4P18085 180 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 AGXTP21549 392 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 GPD1P21695 349 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 MGAT1P26572 445 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PSMB9P28065 219 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 FMO4P31512 558 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 TRIM23P36406 574 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 LSSP48449 732 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 GBX2P52951 348 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 CYP4F2P78329 520 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 TFAMQ00059 246 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 EMX2Q04743 252 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms