RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 B4GALT2O60909 372 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 SKAP2O75563 359 aaPredicted RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 LYPLA1O75608 230 aaPredicted RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 CREG1O75629 220 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CDC123O75794 336 aaPredicted RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 MYO1DO94832 1006 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 SNUPNO95149 360 aaKnown RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 ALBP02768 609 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CHRNGP07510 517 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 ZGLP1P0C6A0 271 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 RNH1P13489 461 aaKnown RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 HSD3B1P14060 373 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CHN1P15882 459 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CPN2P22792 545 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 JAK1P23458 1154 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 HSD3B2P26439 372 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CERS1P27544 350 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 ITPKBP27987 946 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 PTPN4P29074 926 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 TLX1P31314 330 aaPredicted RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 XCR1P46094 333 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 HTR6P50406 440 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 EMP2P54851 167 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 MTTPP55157 894 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 FOXA1P55317 472 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 WDR4P57081 412 aaKnown RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 HYAL2Q12891 473 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CSTF3Q12996 717 aaKnown RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 SRSF6Q13247 344 aaKnown RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 SLAMF1Q13291 335 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CUL3Q13618 768 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 E2F2Q14209 437 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 ABRAXAS2Q15018 415 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 ST3GAL2Q16842 350 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 VWA2Q5GFL6 755 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 ZNF385CQ66K41 422 aaPredicted RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 FAAH2Q6GMR7 532 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 OR4C11Q6IEV9 310 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 ABHD17CQ6PCB6 329 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 FAM198BQ6UWH4 519 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 PAGE2Q7Z2X7 111 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 VN1R5Q7Z5H4 357 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 NUDT13Q86X67 352 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 PDSS2Q86YH6 399 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 RAB43Q86YS6 212 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CLYBLQ8N0X4 340 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 EFCAB3Q8N7B9 438 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 GBP7Q8N8V2 638 aaPredicted RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 KDF1Q8NAX2 398 aaPredicted RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 OR5T3Q8NGG3 340 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 OR51Q1Q8NH59 317 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CDC26Q8NHZ8 85 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 STT3BQ8TCJ2 826 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 METTL21AQ8WXB1 218 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 STARD8Q92502 1023 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 FKBP10Q96AY3 582 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 VPS50Q96JG6 964 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 QRFPRQ96P65 431 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 SERINC2Q96SA4 455 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CRB3Q9BUF7 120 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 SORBS1Q9BX66 1292 aaKnown RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 ILKAPQ9H0C8 392 aaPredicted RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 MANSC1Q9H8J5 431 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 WDR41Q9HAD4 459 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 BRF2Q9HAW0 419 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CPNE5Q9HCH3 593 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 MED4Q9NPJ6 270 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 ENAMQ9NRM1 1142 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 C14orf105Q9NVL8 296 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 VPS29Q9UBQ0 182 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 CTSFQ9UBX1 484 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 IL17BQ9UHF5 180 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 ZNF225Q9UK10 706 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 NXT1Q9UKK6 140 aaKnown RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 FBXW2Q9UKT8 454 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 TCFL5Q9UL49 500 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 MKL2Q9ULH7 1088 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 MRPS33Q9Y291 106 aaKnown RBP5.98□□□□□ -1.45
LTBR-212ENST00000543542 TSC22D4Q9Y3Q8 395 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 TRAF6Q9Y4K3 522 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 MAP4K5Q9Y4K4 846 aa5.98□□□□□ -1.45
LTBR-212ENST00000543542 GNG14A0A1W2PPG7 69 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 SRRM3A6NNA2 597 aaPredicted RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 TMEM233B4DJY2 109 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 C4orf51C9J302 202 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 TAF4O00268 1085 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 PEX12O00623 359 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 PLPP1O14494 284 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 EFSO43281 561 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ITM2AO43736 263 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 GUCY1B2O75343 617 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 SEC22BO75396 215 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 SEMA3DO95025 777 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ETHE1O95571 254 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 IGHEP01854 428 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 GBAP04062 536 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 KLK1P06870 262 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 FHP07954 510 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 LINC00032P0C843 101 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 DHRS4L1P0CG22 281 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms