RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 BEX2Q9BXY8 128 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 WDR26Q9H7D7 661 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 NCKAP1Q9Y2A7 1128 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 TAF1LQ8IZX4 1826 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 TCF3P15923 654 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 GDI1P31150 447 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 YBX1P67809 324 aaKnown RBP15.48■□□□□ 0.07
VARS2-212ENST00000542001 IL18Q14116 193 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 IHHQ14623 411 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 ZNF805Q5CZA5 627 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 ENPP7Q6UWV6 458 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 SPARTQ8N0X7 666 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 ABHD11Q8NFV4 315 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 SLC38A4Q969I6 547 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 TADA1Q96BN2 335 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 REEP4Q9H6H4 257 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 C3orf14Q9HBI5 128 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 CRNNQ9UBG3 495 aaPredicted RBP15.48■□□□□ 0.07
VARS2-212ENST00000542001 MAPRE3Q9UPY8 281 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 SPAG17Q6Q759 2223 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 A0A1W2PP55 124 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 IGLON5A6NGN9 336 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 IDH3BO43837 385 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 PEX11BO96011 259 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 CD247P20963 164 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 FSHRP23945 695 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 TIA1P31483 386 aaKnown RBP eCLIP15.48■□□□□ 0.07
VARS2-212ENST00000542001 COPZ1P61923 177 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 RAB33AQ14088 237 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 SPIN4Q56A73 249 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 ZNF542PQ5EBM4 170 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 ZNF433Q8N7K0 673 aaPredicted RBP15.48■□□□□ 0.07
VARS2-212ENST00000542001 OR52L1Q8NGH7 329 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 FIBINQ8TAL6 211 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 SACM1LQ9NTJ5 587 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 BACE2Q9Y5Z0 518 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 CBSLP0DN79 551 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 CBSP35520 551 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 NRIP1P48552 1158 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 CDK5R2Q13319 367 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 PPIGQ13427 754 aaKnown RBP eCLIP15.48■□□□□ 0.072e-8■■■□□ 16.9
VARS2-212ENST00000542001 CLCA4Q14CN2 919 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 BHLHB9Q6PI77 547 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 LAPTM4BQ86VI4 370 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 H0YAE9 185 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 TLR4O00206 839 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 TAPBPO15533 448 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 RB1P06400 928 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 H1F0P07305 194 aaKnown RBP15.48■□□□□ 0.07
VARS2-212ENST00000542001 FGD2Q7Z6J4 655 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 FNDC8Q8TC99 324 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 MRPS30Q9NP92 439 aaKnown RBP15.48■□□□□ 0.07
VARS2-212ENST00000542001 PAK1IP1Q9NWT1 392 aaPredicted RBP15.48■□□□□ 0.07
VARS2-212ENST00000542001 WBP11Q9Y2W2 641 aaKnown RBP15.48■□□□□ 0.07
VARS2-212ENST00000542001 PCDHB11Q9Y5F2 797 aa15.48■□□□□ 0.07
VARS2-212ENST00000542001 CCDC182A6NF36 153 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 GABRR3A8MPY1 467 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 HIDE1A8MVS5 230 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 FAM227AF5H4B4 570 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 J3KTA2 159 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 NPPAP01160 153 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 HLA-DQA2P01906 255 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 BMP1P13497 986 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 HMGA1P17096 107 aaKnown RBP15.47■□□□□ 0.07
VARS2-212ENST00000542001 OLR1P78380 273 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 VLDLRP98155 873 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 COX10Q12887 443 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 GRIK2Q13002 908 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 SPATA5L1Q9BVQ7 753 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 SLC12A9Q9BXP2 914 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 TAS2R9Q9NYW1 312 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 SLC27A6Q9Y2P4 619 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 THSD7AQ9UPZ6 1657 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 IGLV3-10A0A075B6K4 115 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 FAM240BA0A1B0GVZ2 78 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 OR5F1O95221 314 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 PSMB5P28074 263 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 BTN3A2P78410 334 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 HOXC5Q00444 222 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.47■□□□□ 0.07
VARS2-212ENST00000542001 LIPKQ5VXJ0 399 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 CDC73Q6P1J9 531 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 IZUMO1Q8IYV9 350 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 CELF5Q8N6W0 485 aaKnown RBP15.47■□□□□ 0.07
VARS2-212ENST00000542001 OR10H4Q8NGA5 316 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 ITPAQ9BY32 194 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 ELAC1Q9H777 363 aaKnown RBP15.47■□□□□ 0.07
VARS2-212ENST00000542001 FBXL12Q9NXK8 326 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 SPATA7Q9P0W8 599 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 TMED5Q9Y3A6 229 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 INSL6Q9Y581 213 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 SLC22A1O15245 554 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 C1GALT1C1LP0DN25 315 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 ACPPP15309 386 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 ZNF12P17014 697 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 CCR8P51685 355 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 ATP12AP54707 1039 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 SMIM11AP58511 58 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 KRR1Q13601 381 aaKnown RBP15.47■□□□□ 0.07
VARS2-212ENST00000542001 CAMK1Q14012 370 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms