RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.29□□□□□ -1.08
THBS3-210ENST00000541576 OOSP2Q86WS3 158 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 RIMKLAQ8IXN7 391 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 BHLHE22Q8NFJ8 381 aaPredicted RBP8.29□□□□□ -1.08
THBS3-210ENST00000541576 SLC13A3Q8WWT9 602 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 NELL1Q92832 810 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 TMEM74Q96NL1 305 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 F2RL3Q96RI0 385 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SARGQ9BW04 601 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SPAG4Q9NPE6 437 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 TMEM181Q9P2C4 612 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 FBXO4Q9UKT5 387 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SNX11Q9Y5W9 270 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 MDC1Q14676 2089 aaKnown RBP8.29□□□□□ -1.08
THBS3-210ENST00000541576 PRORSD1PA6NEY8 169 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 AKAP10O43572 662 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 HRO43593 1189 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 NOBOXO60393 691 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 PRMT3O60678 531 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 KLHL18O94889 574 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 CLIC3O95833 236 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 B3GALT4O96024 378 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 HOXB3P14651 431 aaPredicted RBP8.29□□□□□ -1.08
THBS3-210ENST00000541576 MAGP20916 626 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SLC6A2P23975 617 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 GSTM2P28161 218 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 AHRP35869 848 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SLC7A2P52569 658 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SPESP1Q6UW49 350 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 DLEU7Q6UYE1 221 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 PAQR7Q86WK9 346 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 PQLC1Q8N2U9 271 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 WDR48Q8TAF3 677 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 CREB3L4Q8TEY5 395 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 TESCQ96BS2 214 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 HOPXQ9BPY8 73 aaPredicted RBP8.29□□□□□ -1.08
THBS3-210ENST00000541576 PILRBQ9UKJ0 227 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 PCDHGA2Q9Y5H1 932 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 OR5K3A6NET4 321 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 PPM1DO15297 605 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 FKBP9O95302 570 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 GBAP04062 536 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 KLK1P06870 262 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 TYRP1P17643 537 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 S100A3P33764 101 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 ARRB1P49407 418 aaPredicted RBP8.28□□□□□ -1.08
THBS3-210ENST00000541576 CYP4F3Q08477 520 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 ZNF763Q0D2J5 394 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 DPY19L1Q2PZI1 675 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 ARMC6Q6NXE6 501 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 PRMT9Q6P2P2 845 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 CEP68Q76N32 757 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 SLC15A3Q8IY34 581 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 KIAA2013Q8IYS2 634 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 MINDY1Q8N5J2 469 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 DPP10Q8N608 796 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 TSPAN14Q8NG11 270 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 DNAJB14Q8TBM8 379 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 STARD8Q92502 1023 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 PIGKQ92643 395 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 RSC1A1Q92681 617 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 OR52E6Q96RD3 313 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 CMTM6Q9NX76 183 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 CD300AQ9UGN4 299 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 AP1M2Q9Y6Q5 423 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 AGRPO00253 132 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 NME4O00746 187 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 PLPP1O14494 284 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 NDUFS4O43181 175 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 TNFSF14O43557 240 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 NDUFB5O43674 189 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 TNFAIP8O95379 198 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 RPS15AP62244 130 aaKnown RBP8.28□□□□□ -1.08
THBS3-210ENST00000541576 FOXM1Q08050 763 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 MAPKAPK3Q16644 382 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 SLC5A12Q1EHB4 618 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 HKDC1Q2TB90 917 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 PGS1Q32NB8 556 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 OGFOD3Q6PK18 319 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 C17orf82Q86X59 251 aaPredicted RBP8.28□□□□□ -1.08
THBS3-210ENST00000541576 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.28□□□□□ -1.08
THBS3-210ENST00000541576 ZNF786Q8N393 782 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 MFSD9Q8NBP5 474 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 TRPV3Q8NET8 790 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 ELF4Q99607 663 aaPredicted RBP8.28□□□□□ -1.08
THBS3-210ENST00000541576 SLC38A3Q99624 504 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 PKP2Q99959 881 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 SORBS1Q9BX66 1292 aaKnown RBP8.28□□□□□ -1.08
THBS3-210ENST00000541576 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.28□□□□□ -1.08
THBS3-210ENST00000541576 REXO4Q9GZR2 422 aaKnown RBP8.28□□□□□ -1.08
THBS3-210ENST00000541576 SYNPO2LQ9H987 977 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 UCK1Q9HA47 277 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 RSL24D1Q9UHA3 163 aaKnown RBP8.28□□□□□ -1.08
THBS3-210ENST00000541576 MAPRE3Q9UPY8 281 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 SNX13Q9Y5W8 968 aa8.28□□□□□ -1.08
THBS3-210ENST00000541576 ARID1BQ8NFD5 2236 aaPredicted RBP8.28□□□□□ -1.08
THBS3-210ENST00000541576 OR2A25A4D2G3 310 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 GPR37L1O60883 481 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 UBXN7O94888 489 aa8.27□□□□□ -1.08
THBS3-210ENST00000541576 NPPAP01160 153 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms