RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SLC1A2P43004 574 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 MAGEA3P43357 314 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 SCTRP47872 440 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 OLR1P78380 273 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 BASP1P80723 227 aaKnown RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 DHX9Q08211 1270 aaKnown RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 PMPCAQ10713 525 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 FOXD4Q12950 439 aaPredicted RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 SP140Q13342 867 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 CTBP1Q13363 440 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 NAE1Q13564 534 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 PHKG1Q16816 387 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 KCTD19Q17RG1 926 aaPredicted RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 SEL1L2Q5TEA6 688 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 ANKRD22Q5VYY1 191 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 CES4AQ5XG92 561 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 NIPAL1Q6NVV3 410 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 ACAD11Q709F0 780 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 TMEM200AQ86VY9 491 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 LIX1LQ8IVB5 337 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 CYP4Z2PQ8N1L4 340 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 B3GNT7Q8NFL0 401 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 OR56A3Q8NH54 315 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 UTP15Q8TED0 518 aaKnown RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 MBD6Q96DN6 1003 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 PTCHD1Q96NR3 888 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 TTYH2Q9BSA4 534 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 AARSD1Q9BTE6 412 aaKnown RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 DEFB126Q9BYW3 111 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 ATG10Q9H0Y0 220 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 LIME1Q9H400 295 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 GSX1Q9H4S2 264 aaPredicted RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 PARVBQ9HBI1 364 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 SLC24A3Q9HC58 644 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 PRDM9Q9NQV7 894 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 FBXO6Q9NRD1 293 aaPredicted RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 PNPLA3Q9NST1 481 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 CCM2LQ9NUG4 571 aaPredicted RBP6.8□□□□□ -1.32
YBX3-209ENST00000540747 ZFATQ9P243 1243 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 ST6GALNAC2Q9UJ37 374 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 COMMD10Q9Y6G5 202 aa6.8□□□□□ -1.32
YBX3-209ENST00000540747 A0A0G2JNJ9 132 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 TRBV11-1A0A0K0K1C0 115 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 OR14I1A6ND48 311 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 SLC16A5O15375 505 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 PROM1O43490 865 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 ATP8B1O43520 1251 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 CDC40O60508 579 aaKnown RBP eCLIP6.79□□□□□ -1.32
YBX3-209ENST00000540747 ITGA10O75578 1167 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 C8GP07360 202 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 ZNF888P0CJ79 500 aaPredicted RBP6.79□□□□□ -1.32
YBX3-209ENST00000540747 GLI4P10075 376 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 MLNP12872 115 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 RNH1P13489 461 aaKnown RBP6.79□□□□□ -1.32
YBX3-209ENST00000540747 ACVR2AP27037 513 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 AHRP35869 848 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 ADH7P40394 386 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 CCR8P51685 355 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 CLCN2P51788 898 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 GPR85P60893 370 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 REEP5Q00765 189 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 GABPB1Q06547 395 aaPredicted RBP6.79□□□□□ -1.32
YBX3-209ENST00000540747 FOXO1Q12778 655 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 KIF5AQ12840 1032 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 DHX34Q14147 1143 aaKnown RBP6.79□□□□□ -1.32
YBX3-209ENST00000540747 HYAL4Q2M3T9 481 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 GXYLT1Q4G148 440 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 LRRC8EQ6NSJ5 796 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 KIAA1328Q86T90 577 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 GPALPP1Q8IXQ4 340 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 LMNTD2Q8IXW0 634 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 CA13Q8N1Q1 262 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 RNF10Q8N5U6 811 aaKnown RBP6.79□□□□□ -1.32
YBX3-209ENST00000540747 CEP112Q8N8E3 955 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 ANKRD53Q8N9V6 530 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.79□□□□□ -1.32
YBX3-209ENST00000540747 PSD4Q8NDX1 1056 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 CHDHQ8NE62 594 aaPredicted RBP6.79□□□□□ -1.32
YBX3-209ENST00000540747 OR2M7Q8NG81 312 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 CREB3L4Q8TEY5 395 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 EEF1AKMT1Q8WVE0 214 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 ZNF669Q96BR6 464 aaPredicted RBP6.79□□□□□ -1.32
YBX3-209ENST00000540747 ALPK1Q96QP1 1244 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 DESI2Q9BSY9 194 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 HAUS8Q9BT25 410 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 TSGA10Q9BZW7 698 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 DNAJB12Q9NXW2 375 aaKnown RBP6.79□□□□□ -1.32
YBX3-209ENST00000540747 Q9UFV3 132 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 ZFP69BQ9UJL9 534 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 MMACHCQ9Y4U1 282 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 LIPGQ9Y5X9 500 aa6.79□□□□□ -1.32
YBX3-209ENST00000540747 ANK3Q12955 4377 aaKnown RBP6.79□□□□□ -1.32
YBX3-209ENST00000540747 FBN1P35555 2871 aaKnown RBP6.78□□□□□ -1.32
YBX3-209ENST00000540747 A0A1B0GTL3 188 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 CTAGE9A4FU28 777 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 NPIPA2E9PIF3 369 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 NPIPA3F8WFD2 350 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 BCKDKO14874 412 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 OR1F1O43749 312 aa6.78□□□□□ -1.32
YBX3-209ENST00000540747 ZNF354AO60765 605 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms