RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 SLC43A3Q8NBI5 491 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 KREMEN2Q8NCW0 462 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 C7orf57Q8NEG2 295 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 WDR36Q8NI36 951 aaKnown RBP13.53□□□□□ -0.24
INO80E-203ENST00000540562 ARSGQ96EG1 525 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 PHOX2BQ99453 314 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 TMEM39AQ9NV64 488 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 ASF1AQ9Y294 204 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 FAM32AQ9Y421 112 aaKnown RBP13.53□□□□□ -0.24
INO80E-203ENST00000540562 SCN3AQ9NY46 2000 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 PLXND1Q9Y4D7 1925 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 POLR2EP19388 210 aaKnown RBP13.53□□□□□ -0.24
INO80E-203ENST00000540562 SERPINB1P30740 379 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 TAB1Q15750 504 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 STEAP3Q658P3 488 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 SYNPOQ8N3V7 929 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 B3GNT7Q8NFL0 401 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 KLK6Q92876 244 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 WDR12Q9GZL7 423 aaKnown RBP13.53□□□□□ -0.24
INO80E-203ENST00000540562 SIAEQ9HAT2 523 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 STOML2Q9UJZ1 356 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.53□□□□□ -0.24
INO80E-203ENST00000540562 TMEM229AB2RXF0 380 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 PSMD11O00231 422 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 TFECO14948 347 aaPredicted RBP13.53□□□□□ -0.24
INO80E-203ENST00000540562 ATG13O75143 517 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 FGF18O76093 207 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 CBSLP0DN79 551 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 TIMP2P16035 220 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 TNNI3P19429 210 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 CBSP35520 551 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 TRPC1P48995 793 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 ADIPOR2Q86V24 386 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 TCEAL8Q8IYN2 117 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 CBARPQ8N350 705 aaPredicted RBP13.53□□□□□ -0.24
INO80E-203ENST00000540562 ZNF296Q8WUU4 475 aaPredicted RBP13.53□□□□□ -0.24
INO80E-203ENST00000540562 FOPNLQ96NB1 174 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 CNPPD1Q9BV87 410 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 GULP1Q9UBP9 304 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 CLEC2DQ9UHP7 191 aa13.53□□□□□ -0.24
INO80E-203ENST00000540562 COL4A6Q14031 1691 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 LAMA1P25391 3075 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 TRBC2A0A5B9 178 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 TRIM64BA6NI03 449 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 TIA1P31483 386 aaKnown RBP eCLIP13.52□□□□□ -0.24
INO80E-203ENST00000540562 CNR2P34972 360 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 CDK6Q00534 326 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 MTAPQ13126 283 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 PROX2Q3B8N5 592 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 SYT6Q5T7P8 510 aaPredicted RBP13.52□□□□□ -0.24
INO80E-203ENST00000540562 MED27Q6P2C8 311 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 NCCRP1Q6ZVX7 275 aaPredicted RBP13.52□□□□□ -0.24
INO80E-203ENST00000540562 HTR3DQ70Z44 454 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 SVOPQ8N4V2 548 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 OR5AR1Q8NGP9 310 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 BTBD2Q9BX70 525 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 ZNF556Q9HAH1 456 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 ATAD3AQ9NVI7 634 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 FAM120CQ9NX05 1096 aaKnown RBP13.52□□□□□ -0.24
INO80E-203ENST00000540562 PCDHGB3Q9Y5G1 929 aa13.52□□□□□ -0.24
INO80E-203ENST00000540562 GASTP01350 101 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 ADORA3P0DMS8 318 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 ZNF404Q494X3 552 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 SPDYE7PQ495Y7 208 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 PLEKHG7Q6ZR37 379 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 PTCHD4Q6ZW05 846 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 GPR65Q8IYL9 337 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 OR8H2Q8N162 312 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 TCAIMQ8N3R3 496 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 CELF2-AS1Q8N7Q2 184 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 VN1R2Q8NFZ6 395 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 OR5D16Q8NGK9 328 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 JPH3Q8WXH2 748 aaPredicted RBP13.52□□□□□ -0.25
INO80E-203ENST00000540562 GLYATL1Q969I3 302 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 ECHDC3Q96DC8 303 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 F2RL3Q96RI0 385 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 SLC6A16Q9GZN6 736 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 MOSPD1Q9UJG1 213 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 TMED5Q9Y3A6 229 aa13.52□□□□□ -0.25
INO80E-203ENST00000540562 ARID1BQ8NFD5 2236 aaPredicted RBP13.52□□□□□ -0.25
INO80E-203ENST00000540562 TRBV4-1A0A0J9YWV2 114 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 AGAP14A8MT82 685 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 AQP9O43315 295 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 GADD45GO95257 159 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 ALDH1A1P00352 501 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 SELENOWP63302 87 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 KEAP1Q14145 624 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 PTGES3Q15185 160 aaKnown RBP13.51□□□□□ -0.25
INO80E-203ENST00000540562 TPRG1LQ5T0D9 272 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 GCNT6Q5T4J0 391 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 SHFQ7M4L6 423 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 PRSS48Q7RTY5 328 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 C12orf40Q86WS4 652 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 TMC8Q8IU68 726 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 RBM12BQ8IXT5 1001 aaKnown RBP13.51□□□□□ -0.25
INO80E-203ENST00000540562 CEP295NLQ96MC4 621 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 QRSL1Q9H0R6 528 aaKnown RBP13.51□□□□□ -0.25
INO80E-203ENST00000540562 KCNK12Q9HB15 430 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 ZNF226Q9NYT6 803 aa13.51□□□□□ -0.25
INO80E-203ENST00000540562 HS3ST2Q9Y278 367 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms