RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CDC73Q6P1J9 531 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 DUS1LQ6P1R4 473 aaKnown RBP5.11□□□□□ -1.59
CLIP1-207ENST00000536634 SCARA5Q6ZMJ2 495 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 MEX3BQ6ZN04 569 aaKnown RBP5.11□□□□□ -1.59
CLIP1-207ENST00000536634 FOXL2NBQ6ZUU3 175 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 SCD5Q86SK9 330 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 GPD1LQ8N335 351 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 C12orf29Q8N999 325 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 OR2T34Q8NGX1 318 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 OR4C6Q8NH72 309 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 BBS10Q8TAM1 723 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 HMGCLL1Q8TB92 370 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 METTL6Q8TCB7 284 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 SLC2A14Q8TDB8 520 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 GANCQ8TET4 914 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 DDI1Q8WTU0 396 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 ABTB1Q969K4 478 aaPredicted RBP5.11□□□□□ -1.59
CLIP1-207ENST00000536634 JAKMIP2Q96AA8 810 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 SKA1Q96BD8 255 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 RHBDF1Q96CC6 855 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 ACCSQ96QU6 501 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 CCNL2Q96S94 520 aaPredicted RBP5.11□□□□□ -1.59
CLIP1-207ENST00000536634 RSPH9Q9H1X1 276 aaPredicted RBP5.11□□□□□ -1.59
CLIP1-207ENST00000536634 NEUROG2Q9H2A3 272 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 SEBOXQ9HB31 216 aaPredicted RBP5.11□□□□□ -1.59
CLIP1-207ENST00000536634 SCPEP1Q9HB40 452 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 CSNK1G1Q9HCP0 422 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 COMMD8Q9NX08 183 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 TAS2R10Q9NYW0 307 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 ABI3Q9P2A4 366 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 HAO1Q9UJM8 370 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 SCML2Q9UQR0 700 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 SCN8AQ9UQD0 1980 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 ZNF469Q96JG9 3925 aaPredicted RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 ENO4A6NNW6 628 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 AKR1B15C9JRZ8 316 aaPredicted RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 LATO43561 262 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 TIMM44O43615 452 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 ATP8B3O60423 1300 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 RNASEH2AO75792 299 aaKnown RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 GCNT3O95395 438 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 DLATP10515 647 aaKnown RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 UBL4AP11441 157 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 CDH1P12830 882 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 MT3P25713 68 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 RBMS1P29558 406 aaKnown RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 MAT2AP31153 395 aaKnown RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 CD70P32970 193 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 PDX1P52945 283 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 METAP1P53582 386 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 ACSM2AQ08AH3 577 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 CST6Q15828 149 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 LRRK1Q38SD2 2015 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 POM121L1PQ3SYA9 428 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 CXorf66Q5JRM2 361 aaPredicted RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 DCHS2Q6V1P9 2916 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 CLEC20AQ6ZU45 233 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 CHST9Q7L1S5 443 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 CENPQQ7L2Z9 268 aaPredicted RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 R3HCC1LQ7Z5L2 792 aaKnown RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 ACOT1Q86TX2 421 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 SLC9B2Q86UD5 537 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 WDR49Q8IV35 697 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 MMAAQ8IVH4 418 aaKnown RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 C1orf87Q8N0U7 546 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 PCDH20Q8N6Y1 951 aaKnown RBP5.1□□□□□ -1.59
CLIP1-207ENST00000536634 SPATA3Q8NHX4 192 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 HTR3CQ8WXA8 447 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 DNAJC19Q96DA6 116 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 SGF29Q96ES7 293 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 SLC2A11Q9BYW1 496 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 FBXO44Q9H4M3 255 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 FAM49BQ9NUQ9 324 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 ABCB8Q9NUT2 735 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 MED13Q9UHV7 2174 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 RASAL2Q9UJF2 1139 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 GGA2Q9UJY4 613 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 PADI1Q9ULC6 663 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 PLA2G4CQ9UP65 541 aa5.1□□□□□ -1.59
CLIP1-207ENST00000536634 FAM237AA0A1B0GTK4 181 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 A0A1W2PPH5 198 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 GOLGA6L9A6NEM1 432 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 LRRC72A6NJI9 287 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 ZNF233A6NK53 670 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 LMX1BO60663 402 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 NEBLO76041 1014 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 TNFSF15O95150 251 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 GP1BAP07359 652 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 RRM1P23921 792 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 MCM3P25205 808 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 ADORA2BP29275 332 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 HOXD13P35453 343 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 DRD3P35462 400 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 UBA7P41226 1012 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 PSMD8P48556 350 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 CASP4P49662 377 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 ASIC1P78348 528 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 GLIPR1L2Q4G1C9 344 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 C9orf64Q5T6V5 341 aa5.09□□□□□ -1.59
CLIP1-207ENST00000536634 GUSBP11Q6P575 273 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms