RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 HPDP32754 393 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 PTGS2P35354 604 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 GGT5P36269 586 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 CLCN2P51788 898 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 KRTAP10-9P60411 292 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 OC90Q02509 493 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 PCDH1Q08174 1060 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 CSHL1Q14406 222 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 TRIP13Q15645 432 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 MAPKAPK3Q16644 382 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 EMC4Q5J8M3 183 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 TEDDM1Q5T9Z0 273 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 MFSD4BQ5TF39 518 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 STEAP4Q687X5 459 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 NXPE4Q6UWF7 544 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 MBOAT1Q6ZNC8 495 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 SULF2Q8IWU5 870 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 DMRTC2Q8IXT2 367 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 KIF2BQ8N4N8 673 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 MARVELD2Q8N4S9 558 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 ARMC2Q8NEN0 867 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 ZCCHC10Q8TBK6 192 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 GRK7Q8WTQ7 553 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 CA5BP1Q8WTZ4 195 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 WDR34Q96EX3 536 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 LINGO1Q96FE5 620 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 DEFB126Q9BYW3 111 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 AICDAQ9GZX7 198 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 CXXC4Q9H2H0 198 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 ANKRD10Q9NXR5 420 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 COQ3Q9NZJ6 369 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 ZFATQ9P243 1243 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 TSR3Q9UJK0 312 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 ZNF223Q9UK11 482 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 KCNE2Q9Y6J6 123 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 FLNAP21333 2647 aaKnown RBP10.46□□□□□ -0.74
CLSTN3-206ENST00000535668 LRIT2A6NDA9 550 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 PEX1O43933 1283 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 CDC123O75794 336 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 WISP3O95389 354 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 TBX6O95947 436 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 ZNF888P0CJ79 500 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 CD1EP15812 388 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 ZNF37AP17032 561 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 CXCR5P32302 372 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 SLC6A12P48065 614 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 ITGA8P53708 1063 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 BTG2P78543 158 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 TLE4Q04727 773 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 SRSF11Q05519 484 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 CATSPEREQ5SY80 951 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 RBM20Q5T481 1227 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 FAM45BPQ6NSW5 357 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 SLCO4C1Q6ZQN7 724 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 ACAD11Q709F0 780 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 CDH24Q86UP0 819 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 CEP97Q8IW35 865 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 LRRC8AQ8IWT6 810 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 ZNF595Q8IYB9 648 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 CA13Q8N1Q1 262 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 GOLM1Q8NBJ4 401 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 FAM45AQ8TCE6 357 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 CHTF18Q8WVB6 975 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 GAL3ST3Q96A11 431 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 CERS2Q96G23 380 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 VMP1Q96GC9 406 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 SGCZQ96LD1 299 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 QRFPRQ96P65 431 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 AIF1LQ9BQI0 150 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 CAPS2Q9BXY5 557 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 SPNS1Q9H2V7 528 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 POPDC3Q9HBV1 291 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 LZTFL1Q9NQ48 299 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 NECTIN3Q9NQS3 549 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 NPDC1Q9NQX5 325 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 IARS2Q9NSE4 1012 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 GPRC5BQ9NZH0 403 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 PPT2Q9UMR5 302 aa10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 NSD1Q96L73 2696 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-206ENST00000535668 A0A1B0GTH9 108 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 CTAGE15A4D2H0 777 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 ZNF860A6NHJ4 632 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 FAM227AF5H4B4 570 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 PGRMC1O00264 195 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 CYR61O00622 381 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 ITGA10O75578 1167 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 CLEC3AO75596 197 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 SCELO95171 688 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 STATHP02808 62 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 TUBB4AP04350 444 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 GNAZP19086 355 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 PTGER1P34995 402 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 VPS41P49754 854 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 MEOX1P50221 254 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 STXBP1P61764 594 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 ELAVL1Q15717 326 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 NDUFAF5Q5TEU4 345 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 HECTD2Q5U5R9 776 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 PAOXQ6QHF9 649 aa10.44□□□□□ -0.74
CLSTN3-206ENST00000535668 CTAGE6Q86UF2 777 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms