RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.44□□□□□ -0.97e-6■■■■□ 19.6
CLSTN3-203ENST00000534830 GSX1Q9H4S2 264 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 WHRNQ9P202 907 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 TEKT2Q9UIF3 430 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 MTO1Q9Y2Z2 717 aaKnown RBP9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 KCNE2Q9Y6J6 123 aa9.44□□□□□ -0.9
CLSTN3-203ENST00000534830 FAM221AA4D161 298 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 ASPDHA6ND91 283 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 PABPN1LA6NDY0 278 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 FAM187AA6NFU0 413 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 URADA6NGE7 173 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 TAPBPO15533 448 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 PRAMEF4O60810 478 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 PIAS1O75925 651 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 RASAL1O95294 804 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 C1GALT1C1LP0DN25 315 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 KLK2P20151 261 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 SAT1P21673 171 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 SSTR1P30872 391 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 CD96P40200 585 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 GDF5P43026 501 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 SKP1P63208 163 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 OLR1P78380 273 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 BTG2P78543 158 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 MRPS25P82663 173 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF33BQ06732 778 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 TUBA3CQ13748 450 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 TGFBIQ15582 683 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 TSNQ15631 228 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 MEP1AQ16819 746 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 C18orf21Q32NC0 220 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 ZNF766Q5HY98 468 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 CDKL4Q5MAI5 379 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 PRAMEF9Q5VWM5 478 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 FCRLBQ6BAA4 426 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 TUBA3EQ6PEY2 450 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 SLCO4C1Q6ZQN7 724 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 TMPRSS11BQ86T26 416 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 ADAMTSL2Q86TH1 951 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 LGI4Q8N135 537 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 ARMC10Q8N2F6 343 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 CHDHQ8NE62 594 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 NFAM1Q8NET5 270 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 SPATA4Q8NEY3 305 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 PYROXD1Q8WU10 500 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 SIGLEC12Q96PQ1 595 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 LPAR4Q99677 370 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 GPR22Q99680 433 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 RBCK1Q9BYM8 510 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 PHACTR1Q9C0D0 580 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 NT5DC2Q9H857 520 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 TRIM45Q9H8W5 580 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 KCNK13Q9HB14 408 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 GPAMQ9HCL2 828 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 GRHL1Q9NZI5 618 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 CTNNAL1Q9UBT7 734 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 DYRK1BQ9Y463 629 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 CLDN16Q9Y5I7 305 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 EML6Q6ZMW3 1958 aa9.43□□□□□ -0.9
CLSTN3-203ENST00000534830 MAP1AP78559 2803 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 TCRBV16S1A1N1A0A5B0 115 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 LRIT2A6NDA9 550 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 FAM159BA6NKW6 160 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 A8MUI8 341 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 FAM227AF5H4B4 570 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 RAD51CO43502 376 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 PRMT3O60678 531 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 SLC19A2O60779 497 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 NEURL1O76050 574 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 CRYABP02511 175 aaKnown RBP9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 SERPIND1P05546 499 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 MYBL2P10244 700 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 CD1DP15813 335 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 GNAZP19086 355 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 JAK1P23458 1154 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 OR4D2P58180 307 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 GPX6P59796 221 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 RAB8AP61006 207 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 ACTN3Q08043 901 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 E2F2Q14209 437 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 ZKSCAN8Q15776 578 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 C3AR1Q16581 482 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 ADPRMQ3LIE5 342 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 MAATS1Q7Z4T9 603 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 VN1R5Q7Z5H4 357 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 CA13Q8N1Q1 262 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 TTLQ8NG68 377 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 SUN3Q8TAQ9 357 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 MS4A6EQ96DS6 147 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 WDR34Q96EX3 536 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 SEC16BQ96JE7 1060 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 UBXN10Q96LJ8 280 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 QRFPRQ96P65 431 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 RBBP8Q99708 897 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 CPNE1Q99829 537 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 TMEM79Q9BSE2 394 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 PITHD1Q9GZP4 211 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 CAB39LQ9H9S4 337 aa9.42□□□□□ -0.9
CLSTN3-203ENST00000534830 NECTIN3Q9NQS3 549 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms