RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 KCNK13Q9HB14 408 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 MMP25Q9NPA2 562 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 AGPAT4Q9NRZ5 378 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 DNAJC11Q9NVH1 559 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 TXNDC16Q9P2K2 825 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 COPG2Q9UBF2 871 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 C19orf25Q9UFG5 118 aaPredicted RBP16.7■□□□□ 0.26
SMG1-203ENST00000532700 TRAV17A0A0B4J275 112 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 MYOCOSA0A1B0GUC4 107 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 TCRBV16S1A1N1A0A5B0 115 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 LRIT2A6NDA9 550 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 LRRC14BA6NHZ5 514 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 UBXN8O00124 270 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 ERI3O43414 337 aaKnown RBP16.69■□□□□ 0.26
SMG1-203ENST00000532700 EDN3P14138 238 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 CERS1P27544 350 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 STX2P32856 288 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 GRTP1Q5TC63 336 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 FAM219BQ5XKK7 198 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 FAM180AQ6UWF9 173 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 QSOX2Q6ZRP7 698 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 UBE3DQ7Z6J8 389 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 ZNF227Q86WZ6 799 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 CYP4X1Q8N118 509 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 TBC1D19Q8N5T2 526 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 SNX31Q8N9S9 440 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 M1APQ8TC57 530 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 ELP5Q8TE02 316 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 KCTD4Q8WVF5 259 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 CCT6BQ92526 530 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 NXNL1Q96CM4 212 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 FMO2Q99518 471 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 OLAHQ9NV23 265 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 CD274Q9NZQ7 290 aa16.69■□□□□ 0.26
SMG1-203ENST00000532700 ZNF223Q9UK11 482 aaPredicted RBP16.69■□□□□ 0.26
SMG1-203ENST00000532700 SPTBN1Q01082 2364 aaKnown RBP16.69■□□□□ 0.26
SMG1-203ENST00000532700 DOPEY1Q5JWR5 2465 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 ZNHIT1O43257 154 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 CCNT2O60583 730 aaKnown RBP16.68■□□□□ 0.26
SMG1-203ENST00000532700 PRMT3O60678 531 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 PRAMEF2O60811 474 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 SH3BGRLO75368 114 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 RHOXF2BP0C7M4 288 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 RNH1P13489 461 aaKnown RBP16.68■□□□□ 0.26
SMG1-203ENST00000532700 ICAM2P13598 275 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 MTHFD2P13995 350 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 SPRP35270 261 aaPredicted RBP16.68■□□□□ 0.26
SMG1-203ENST00000532700 CD96P40200 585 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 PLA2G16P53816 162 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 ATP6V0D1P61421 351 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 PDK4Q16654 411 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 ADPRMQ3LIE5 342 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 XKR6Q5GH73 641 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 SPINK14Q6IE38 97 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 SULT1C3Q6IMI6 304 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 RELL1Q8IUW5 271 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 FAM47BQ8NA70 645 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 NR4A3Q92570 626 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 GAL3ST3Q96A11 431 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 WDR34Q96EX3 536 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 F2RL3Q96RI0 385 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 LPAR4Q99677 370 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 RHOXF2Q9BQY4 288 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 NINJ2Q9NZG7 142 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 RNF112Q9ULX5 631 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 SLC5A6Q9Y289 635 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 POLEQ07864 2286 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 NAV2Q8IVL1 2488 aa16.68■□□□□ 0.26
SMG1-203ENST00000532700 LRRTM2O43300 516 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 STK16O75716 305 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 IL10P22301 178 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 ECHS1P30084 290 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 PHBP35232 272 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 ACTN3Q08043 901 aaPredicted RBP16.67■□□□□ 0.26
SMG1-203ENST00000532700 EXT1Q16394 746 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 C1QL3Q5VWW1 255 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 ZNF793Q6ZN11 406 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 SCUBE1Q8IWY4 988 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 BCORP1Q8N888 145 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 SREK1Q8WXA9 508 aaKnown RBP16.67■□□□□ 0.26
SMG1-203ENST00000532700 CD244Q9BZW8 370 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 CDCP1Q9H5V8 836 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 NT5DC2Q9H857 520 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 PRDM9Q9NQV7 894 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 KLHL1Q9NR64 748 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 GPRC5BQ9NZH0 403 aa16.67■□□□□ 0.26
SMG1-203ENST00000532700 SAGE2PA6NJ88 616 aa16.66■□□□□ 0.26
SMG1-203ENST00000532700 GABRR3A8MPY1 467 aa16.66■□□□□ 0.26
SMG1-203ENST00000532700 SUPT3HB4E1H0 165 aa16.66■□□□□ 0.26
SMG1-203ENST00000532700 RTCAO00442 366 aaKnown RBP16.66■□□□□ 0.26
SMG1-203ENST00000532700 PRKNO60260 465 aaPredicted RBP16.66■□□□□ 0.26
SMG1-203ENST00000532700 SUPT3HO75486 399 aa16.66■□□□□ 0.26
SMG1-203ENST00000532700 CLEC3AO75596 197 aa16.66■□□□□ 0.26
SMG1-203ENST00000532700 NEURL1O76050 574 aa16.66■□□□□ 0.26
SMG1-203ENST00000532700 JAK1P23458 1154 aa16.66■□□□□ 0.26
SMG1-203ENST00000532700 TPP2P29144 1249 aaPredicted RBP16.66■□□□□ 0.26
SMG1-203ENST00000532700 CHIT1Q13231 466 aa16.66■□□□□ 0.26
SMG1-203ENST00000532700 NAB1Q13506 487 aa16.66■□□□□ 0.26
SMG1-203ENST00000532700 E2F2Q14209 437 aa16.66■□□□□ 0.26
SMG1-203ENST00000532700 ELOAQ14241 798 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms