RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 FAR1Q8WVX9 515 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 MS4A6EQ96DS6 147 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 RNF32Q9H0A6 362 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 MMP25Q9NPA2 562 aa16.2■□□□□ 0.18
PHRF1-204ENST00000532550 ZNF490Q9ULM2 529 aaPredicted RBP16.2■□□□□ 0.18
PHRF1-204ENST00000532550 HIVEP3Q5T1R4 2406 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 A0A0G2JN53 185 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 SYCE1LA8MT33 242 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 FAM227AF5H4B4 570 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 UBXN8O00124 270 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 ERI3O43414 337 aaKnown RBP16.19■□□□□ 0.18
PHRF1-204ENST00000532550 TYK2P29597 1187 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 HNRNPH1P31943 449 aaKnown RBP16.19■□□□□ 0.18
PHRF1-204ENST00000532550 BTG2P78543 158 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 TBCCQ15814 346 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 H3F3CQ6NXT2 135 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 TRIM40Q6P9F5 258 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 FAM180AQ6UWF9 173 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 LRRC70Q7Z2Q7 622 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 RELL1Q8IUW5 271 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 RHEBL1Q8TAI7 183 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 KCTD4Q8WVF5 259 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 WDR34Q96EX3 536 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 ATOH8Q96SQ7 321 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 NPLQ9BXD5 320 aaPredicted RBP16.19■□□□□ 0.18
PHRF1-204ENST00000532550 REXO4Q9GZR2 422 aaKnown RBP16.19■□□□□ 0.18
PHRF1-204ENST00000532550 AICDAQ9GZX7 198 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 ACSS3Q9H6R3 686 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 PRDM9Q9NQV7 894 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 ABI3Q9P2A4 366 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 OPTCQ9UBM4 332 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 ZGRF1Q86YA3 2104 aa16.19■□□□□ 0.18
PHRF1-204ENST00000532550 CCDC189A1A4V9 331 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 OR5H15A6NDH6 313 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 C4orf51C9J302 202 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 K7EPI3 171 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 B3GALT2O43825 422 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 PRAMEF4O60810 478 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 PLA2G16P53816 162 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 TAS2R50P59544 299 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 TGM3Q08188 693 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 RUNX2Q13950 521 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 ACAP2Q15057 778 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 MEP1AQ16819 746 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 ACER2Q5QJU3 275 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 PRAMEF9Q5VWM5 478 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 KLC3Q6P597 504 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 BCORP1Q8N888 145 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 ST6GALNAC3Q8NDV1 305 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 OR2L5Q8NG80 312 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 KIF18AQ8NI77 898 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 UBE2E3Q969T4 207 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 FMO2Q99518 471 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 CDC42EP4Q9H3Q1 356 aaKnown RBP16.18■□□□□ 0.18
PHRF1-204ENST00000532550 SNX15Q9NRS6 342 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 ANGPTL3Q9Y5C1 460 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 IKBKGQ9Y6K9 419 aa16.18■□□□□ 0.18
PHRF1-204ENST00000532550 SPTBN1Q01082 2364 aaKnown RBP16.18■□□□□ 0.18
PHRF1-204ENST00000532550 POLEQ07864 2286 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 CPAMD8Q8IZJ3 1885 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 A0A096LPK6 155 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 HMX2A2RU54 273 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 BLACEA4D250 179 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 CLDN4O14493 209 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 SEMA7AO75326 666 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 KLHL2O95198 593 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 ACSL3O95573 720 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 INHBAP08476 426 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 EPB42P16452 691 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 MAOAP21397 527 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 CASP2P42575 452 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 SLC26A5P58743 744 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 IRF9Q00978 393 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 ADPRMQ3LIE5 342 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 FCRLBQ6BAA4 426 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 CENPLQ8N0S6 344 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-204ENST00000532550 SLC5A8Q8N695 610 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 SRFBP1Q8NEF9 429 aaKnown RBP16.17■□□□□ 0.18
PHRF1-204ENST00000532550 SSC4DQ8WTU2 575 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 COPS7BQ9H9Q2 264 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-204ENST00000532550 MRPS33Q9Y291 106 aaKnown RBP16.17■□□□□ 0.18
PHRF1-204ENST00000532550 MMACHCQ9Y4U1 282 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 ASB1Q9Y576 335 aa16.17■□□□□ 0.18
PHRF1-204ENST00000532550 USP9YO00507 2555 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-204ENST00000532550 SPTAN1Q13813 2472 aaKnown RBP16.16■□□□□ 0.18
PHRF1-204ENST00000532550 TCRBV16S1A1N1A0A5B0 115 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 GFAPP14136 432 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 EDN3P14138 238 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 EPORP19235 508 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 CD22P20273 847 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 MSH2P43246 934 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 SERPINB8P50452 374 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 MTTPP55157 894 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 RAB38P57729 211 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 RCN2Q14257 317 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 INAQ16352 499 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 PFKFB4Q16877 469 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 MED27Q6P2C8 311 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 ABHD17CQ6PCB6 329 aa16.16■□□□□ 0.18
PHRF1-204ENST00000532550 CHSY3Q70JA7 882 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms