RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 MAGEB17A8MXT2 336 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 RTCAO00442 366 aaKnown RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 KRT38O76015 456 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 ABHD2P08910 425 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 CERS1P27544 350 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 HNRNPFP52597 415 aaKnown RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 ALDH18A1P54886 795 aaKnown RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 SKP1P63208 163 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 E2F2Q14209 437 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 NAA30Q147X3 362 aaPredicted RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 TBCCQ15814 346 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 BTBD16Q32M84 506 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 ADPRMQ3LIE5 342 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 PAPD4Q6PIY7 484 aaKnown RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 TRMT10CQ7L0Y3 403 aaKnown RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 UBE3DQ7Z6J8 389 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 MYLK4Q86YV6 388 aaPredicted RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 PTGR2Q8N8N7 351 aaPredicted RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 ZNF473Q8WTR7 871 aaKnown RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 TM9SF4Q92544 642 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 SNRNP40Q96DI7 357 aaKnown RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 SCYL1Q96KG9 808 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 PTCHD1Q96NR3 888 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 TUBB6Q9BUF5 446 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 NECTIN3Q9NQS3 549 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 C19orf25Q9UFG5 118 aaPredicted RBP14.58□□□□□ -0.08
CTSB-225ENST00000532409 NTNG1Q9Y2I2 539 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 PCDHGA10Q9Y5H3 936 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 CPAMD8Q8IZJ3 1885 aa14.58□□□□□ -0.08
CTSB-225ENST00000532409 ASH1LQ9NR48 2969 aaKnown RBP14.57□□□□□ -0.08
CTSB-225ENST00000532409 A8MUI8 341 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 TGFBR3LH3BV60 316 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 SAP18O00422 153 aaKnown RBP14.57□□□□□ -0.08
CTSB-225ENST00000532409 E2F3O00716 465 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 PCDH17O14917 1159 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 MAN1A2O60476 641 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 KLHL41O60662 606 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 PRMT3O60678 531 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 SBK3P0C264 359 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 RNH1P13489 461 aaKnown RBP14.57□□□□□ -0.08
CTSB-225ENST00000532409 EPB42P16452 691 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 IL10P22301 178 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 GNLYP22749 145 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 JAK1P23458 1154 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 CASP2P42575 452 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 OR4D2P58180 307 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 DDX39BQ13838 428 aaKnown RBP14.57□□□□□ -0.08
CTSB-225ENST00000532409 SLC29A2Q14542 456 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 CRB2Q5IJ48 1285 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 PAGE2BQ5JRK9 111 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 MED27Q6P2C8 311 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 ABHD17CQ6PCB6 329 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 ZNF793Q6ZN11 406 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 RPS27LQ71UM5 84 aaKnown RBP14.57□□□□□ -0.08
CTSB-225ENST00000532409 TAOK1Q7L7X3 1001 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 GOLGA7Q7Z5G4 137 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 LAS2Q8IYD9 372 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 CYP4X1Q8N118 509 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 EFCAB3Q8N7B9 438 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 FAM47BQ8NA70 645 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 OR2L5Q8NG80 312 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 OR7G3Q8NG95 312 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 DNAJB14Q8TBM8 379 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 PPP4R1Q8TF05 950 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 PHF21BQ96EK2 531 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 FAR2Q96K12 515 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 CSF3RQ99062 836 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 SORBS1Q9BX66 1292 aaKnown RBP14.57□□□□□ -0.08
CTSB-225ENST00000532409 MS4A8Q9BY19 250 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 PITHD1Q9GZP4 211 aaPredicted RBP14.57□□□□□ -0.08
CTSB-225ENST00000532409 EPS8L2Q9H6S3 715 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 PRM3Q9NNZ6 103 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 PRDM7Q9NQW5 492 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 ASF1BQ9NVP2 202 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 ANGPTL3Q9Y5C1 460 aa14.57□□□□□ -0.08
CTSB-225ENST00000532409 LRRK2Q5S007 2527 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 HECTD1Q9ULT8 2610 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 SETXQ7Z333 2677 aaKnown RBP14.56□□□□□ -0.08
CTSB-225ENST00000532409 IGKV3D-11A0A0A0MRZ8 115 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 A8MUA0 341 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 FOXO6A8MYZ6 492 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 PSMD12O00232 456 aaPredicted RBP14.56□□□□□ -0.08
CTSB-225ENST00000532409 ZNF500O60304 480 aaPredicted RBP14.56□□□□□ -0.08
CTSB-225ENST00000532409 TGFB1P01137 390 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 UQCRHP07919 91 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 CYC1P08574 325 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 SNRPAP09012 282 aaKnown RBP14.56□□□□□ -0.08
CTSB-225ENST00000532409 GSTM2P28161 218 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 EEF1DP29692 281 aaKnown RBP14.56□□□□□ -0.08
CTSB-225ENST00000532409 PPP2R1BP30154 601 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 PIK3CGP48736 1102 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 SRSF1Q07955 248 aaKnown RBP eCLIP14.56□□□□□ -0.08
CTSB-225ENST00000532409 ACTN3Q08043 901 aaPredicted RBP14.56□□□□□ -0.08
CTSB-225ENST00000532409 LAPTM5Q13571 262 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 GTF2H2Q13888 395 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 PCBP2Q15366 365 aaKnown RBP eCLIP14.56□□□□□ -0.08
CTSB-225ENST00000532409 HIST2H2ACQ16777 129 aaPredicted RBP14.56□□□□□ -0.08
CTSB-225ENST00000532409 PLAG1Q6DJT9 500 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 HIST2H2AA3Q6FI13 130 aa14.56□□□□□ -0.08
CTSB-225ENST00000532409 GRHL2Q6ISB3 625 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms