RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 OR10A4Q9H209 315 aa5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 MANSC1Q9H8J5 431 aa5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 CPNE5Q9HCH3 593 aa5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 SYTL2Q9HCH5 934 aa5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 CCDC177Q9NQR7 707 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZDHHC18Q9NUE0 388 aa5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 RIC8BQ9NVN3 520 aa5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 SPATA7Q9P0W8 599 aa5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 MTRF1LQ9UGC7 380 aaKnown RBP5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 SERTAD3Q9UJW9 196 aa5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 TMEM184BQ9Y519 407 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 PSAT1Q9Y617 370 aa5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 BPTFQ12830 3046 aa5.54□□□□□ -1.52
HMGB1P42-201ENST00000532126 TPRP12270 2363 aaKnown RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 TEX51A0A1B0GUA7 166 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 FAM95CA0A1B0GW59 222 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 FAM159BA6NKW6 160 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 CXorf49A8MYA2 514 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 TMEM150CB9EJG8 249 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 SLC16A5O15375 505 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 PRICKLE3O43900 615 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 PIAS1O75925 651 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 ACTL6BO94805 426 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 SLC16A8O95907 504 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 MT-ND3P03897 115 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 NTRK1P04629 796 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 HIST1H2AGP0C0S8 130 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 MSL3P1P0C860 447 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 VSIG8P0DPA2 414 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 LIFP15018 202 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 FOSL1P15407 271 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 RAB6AP20340 208 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 HIST1H2ADP20671 130 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 CYP2A7P20853 494 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 MAGP20916 626 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 FDXRP22570 491 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 PHBP35232 272 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 RPA3P35244 121 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 GP5P40197 560 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 PEX19P40855 299 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 PGGT1BP53609 377 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 PNLIPRP1P54315 467 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 NRG3P56975 720 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 GPX6P59796 221 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 AP2B1P63010 937 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 TIAL1Q01085 375 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 SRSF6Q13247 344 aaKnown RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 SP140Q13342 867 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 TSTA3Q13630 321 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 FASTKQ14296 549 aaKnown RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 NAA25Q14CX7 972 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZIC1Q15915 447 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 ARHGAP40Q5TG30 622 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 ANKRD34AQ69YU3 496 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 TIPARPQ7Z3E1 657 aaKnown RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 R3HCC1LQ7Z5L2 792 aaKnown RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 KRT73Q86Y46 540 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 FAM20CQ8IXL6 584 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 IFT20Q8IY31 132 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 GPR135Q8IZ08 494 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 CDYL2Q8N8U2 506 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 LSM14AQ8ND56 463 aaKnown RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 HIPK4Q8NE63 616 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 OR2A1Q8NGT9 310 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 OR1L3Q8NH93 324 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 MCOLN3Q8TDD5 553 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 DENND1AQ8TEH3 1009 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZNF480Q8WV37 535 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 NEIL1Q96FI4 390 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 TSPAN17Q96FV3 270 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 HIST1H2AHQ96KK5 128 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 OLFM1Q99784 485 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 CPNE1Q99829 537 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 HIST1H2AJQ99878 128 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 H2AFJQ9BTM1 129 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 EFHD1Q9BUP0 239 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 ACAT2Q9BWD1 397 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 CDADC1Q9BWV3 514 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 TRIM54Q9BYV2 358 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 SLC7A5P2Q9GIP4 190 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 CHRNA10Q9GZZ6 450 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 MRPL18Q9H0U6 180 aaKnown RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 RHOJQ9H4E5 214 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 RABEP2Q9H5N1 569 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 PRORYQ9H606 182 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 GPN2Q9H9Y4 310 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 PARVBQ9HBI1 364 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 LRRC4CQ9HCJ2 640 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 FAM60AQ9NP50 221 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 SCOCQ9UIL1 159 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 ADAMTS6Q9UKP5 1117 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 PADI1Q9ULC6 663 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 PLCL2Q9UPR0 1127 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 KLHL20Q9Y2M5 609 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZNF281Q9Y2X9 895 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 FRYQ5TBA9 3013 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 KNTC1P50748 2209 aa5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZFC3H1O60293 1989 aaKnown RBP5.53□□□□□ -1.52
HMGB1P42-201ENST00000532126 MAP1BP46821 2468 aaKnown RBP5.52□□□□□ -1.53
HMGB1P42-201ENST00000532126 LOC101059948A0A1B0GTJ6 334 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms