RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	PWP1	Q13610	501 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ZIK1	Q3SY52	487 aa	Predicted RBP	13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	C6orf136	Q5SQH8	315 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	SULT1C3	Q6IMI6	304 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	SLC2A7	Q6PXP3	512 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	SLC16A12	Q6ZSM3	486 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	SLC9B2	Q86UD5	537 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	CHCHD4	Q8N4Q1	142 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	FAM46D	Q8NEK8	389 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	BPIFB6	Q8NFQ5	453 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	PROKR1	Q8TCW9	393 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	SDCCAG3	Q96C92	435 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	CXorf40B	Q96DE9	158 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ZNF382	Q96SR6	550 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	CGREF1	Q99674	301 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	OSBPL10	Q9BXB5	764 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ARRDC1-AS1	Q9H2J1	176 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	AKIP1	Q9NQ31	210 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	PRDM8	Q9NQV8	689 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ARL15	Q9NXU5	204 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	CD274	Q9NZQ7	290 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	SLAMF8	Q9P0V8	285 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ZNF225	Q9UK10	706 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	PDE10A	Q9Y233	779 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	PLEKHM1	Q9Y4G2	1056 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	TNPO3	Q9Y5L0	923 aa	Known RBP	13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	B4GAT1	O43505	415 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	LRP3	O75074	770 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	HOXB6	P17509	224 aa	Known RBP	13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	EPHA8	P29322	1005 aa	Predicted RBP	13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	OCA2	Q04671	838 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	TCF15	Q12870	199 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	IL18R1	Q13478	541 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	AQP6	Q13520	282 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ARHGAP19	Q14CB8	494 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	LPAL2	Q16609	132 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	HLA-B	Q31612	363 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	PLA2G2C	Q5R387	149 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	GPRIN3	Q6ZVF9	776 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	STK32C	Q86UX6	486 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	TRIM48	Q8IWZ4	208 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	CLEC4F	Q8N1N0	589 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	PIK3C3	Q8NEB9	887 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ZNF555	Q8NEP9	628 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	CCL4L1	Q8NHW4	92 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	S100Z	Q8WXG8	99 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ZNF566	Q969W8	418 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	VMP1	Q96GC9	406 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ALPK1	Q96QP1	1244 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	EGFL8	Q99944	293 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	HMG20A	Q9NP66	347 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	IMP3	Q9NV31	184 aa	Known RBP	13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ATAD3A	Q9NVI7	634 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	SPATA7	Q9P0W8	599 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	TSR3	Q9UJK0	312 aa	Known RBP	13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	NEUROG3	Q9Y4Z2	214 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ST14	Q9Y5Y6	855 aa		13.98	□□□□□ -0.17
NR1H3-231	ENST00000529540	ARHGEF33	A8MVX0	844 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	SCAMP1	O15126	338 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	BCAS1	O75363	584 aa	Predicted RBP	13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	HTR1A	P08908	422 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	ALOX5	P09917	674 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	ZNF883	P0CG24	379 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	OPRL1	P41146	370 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	PPP2R2B	Q00005	443 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	BNC1	Q01954	994 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	ITGAD	Q13349	1161 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	CLCA4	Q14CN2	919 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	SPCS2	Q15005	226 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	RPE65	Q16518	533 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	RBBP7	Q16576	425 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	TRIM16L	Q309B1	348 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	ZDHHC13	Q8IUH4	622 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	HOMEZ	Q8IX15	550 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	PRSS33	Q8NF86	280 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	ZDHHC1	Q8WTX9	485 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	FBLIM1	Q8WUP2	373 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	ATOH1	Q92858	354 aa	Predicted RBP	13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	POP5	Q969H6	163 aa	Known RBP	13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	SH3KBP1	Q96B97	665 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	FERD3L	Q96RJ6	166 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	INSM2	Q96T92	566 aa	Predicted RBP	13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	RBM4B	Q9BQ04	359 aa	Known RBP	13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	HGH1	Q9BTY7	390 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	RBM4	Q9BWF3	364 aa	Known RBP	13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	FUNDC2	Q9BWH2	189 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	GAREM1	Q9H706	876 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	AP3M1	Q9Y2T2	418 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	PCDHGB1	Q9Y5G3	927 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	SNX5	Q9Y5X3	404 aa		13.97	□□□□□ -0.17
NR1H3-231	ENST00000529540	ZFC3H1	O60293	1989 aa	Known RBP	13.96	□□□□□ -0.17
NR1H3-231	ENST00000529540		G3V2T6	193 aa		13.96	□□□□□ -0.17
NR1H3-231	ENST00000529540	YY2	O15391	372 aa		13.96	□□□□□ -0.17
NR1H3-231	ENST00000529540	GMNN	O75496	209 aa		13.96	□□□□□ -0.17
NR1H3-231	ENST00000529540	VIP	P01282	170 aa		13.96	□□□□□ -0.17
NR1H3-231	ENST00000529540	IL7R	P16871	459 aa		13.96	□□□□□ -0.17
NR1H3-231	ENST00000529540	PRDX3	P30048	256 aa	Known RBP	13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms