RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	BTG2	P78543	158 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	LAPTM5	Q13571	262 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	RUNX2	Q13950	521 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	NAA30	Q147X3	362 aa	Predicted RBP	11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	ZNF169	Q14929	603 aa	Predicted RBP	11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	TLR1	Q15399	786 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	EXT1	Q16394	746 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	PFKFB4	Q16877	469 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	TECRL	Q5HYJ1	363 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	PAGE2B	Q5JRK9	111 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	KLC3	Q6P597	504 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	ABHD17C	Q6PCB6	329 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	QSOX2	Q6ZRP7	698 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	TEX9	Q8N6V9	391 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	CATSPER1	Q8NEC5	780 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	OR2L5	Q8NG80	312 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	BARD1	Q99728	777 aa	Known RBP	11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	RHOXF2	Q9BQY4	288 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	REXO4	Q9GZR2	422 aa	Known RBP	11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	ASF1B	Q9NVP2	202 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	ZNF358	Q9NW07	568 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	PLA2G3	Q9NZ20	509 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	MAP10	Q9P2G4	905 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	ZNF180	Q9UJW8	692 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	ANKRD12	Q6UB98	2062 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	NAV2	Q8IVL1	2488 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	PCM1	Q15154	2024 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	LRRK2	Q5S007	2527 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	MDC1	Q14676	2089 aa	Known RBP	11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	DYTN	A2CJ06	578 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	TCP11X1	B4DZS4	312 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	PSMD12	O00232	456 aa	Predicted RBP	11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	PRMT3	O60678	531 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	WDPCP	O95876	746 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	FAM153B	P0C7A2	387 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	EPB42	P16452	691 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	MAOA	P21397	527 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	CNTF	P26441	200 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	CERS1	P27544	350 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	GCA	P28676	217 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	MSH2	P43246	934 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	TSFM	P43897	325 aa	Known RBP	11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	ALDH18A1	P54886	795 aa	Known RBP	11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	SLC26A5	P58743	744 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	ARG2	P78540	354 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	ACTN3	Q08043	901 aa	Predicted RBP	11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	FAM153C	Q494X1	144 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	MED27	Q6P2C8	311 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	TAOK1	Q7L7X3	1001 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	UBE3D	Q7Z6J8	389 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	SCUBE1	Q8IWY4	988 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	IFT20	Q8IY31	132 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	LAS2	Q8IYD9	372 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	M1AP	Q8TC57	530 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	ZNF473	Q8WTR7	871 aa	Known RBP	11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	FAR2	Q96K12	515 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	PTCHD1	Q96NR3	888 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	F2RL3	Q96RI0	385 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	LPAR4	Q99677	370 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	MS4A8	Q9BY19	250 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	MMP25	Q9NPA2	562 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	NECTIN3	Q9NQS3	549 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	PRDM9	Q9NQV7	894 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	CPSF2	Q9P2I0	782 aa	Known RBP	11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	IKBKG	Q9Y6K9	419 aa		11.04	□□□□□ -0.64
PSMC3-205	ENST00000528362	CCDC88C	Q9P219	2028 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362		A0A088AWK7	358 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	EXOC1L	A0A1B0GW35	172 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	TCRBV16S1A1N1	A0A5B0	115 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	TRIM49D1	C9J1S8	452 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	TGFBR3L	H3BV60	316 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	RIPK2	O43353	540 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	B3GALT2	O43825	422 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	KRT38	O76015	456 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	SIX3	O95343	332 aa	Predicted RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	F10	P00742	488 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	UQCRH	P07919	91 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	ZNF10	P21506	573 aa	Predicted RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	HPD	P32754	393 aa	Predicted RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	TNFSF10	P50591	281 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	HNRNPF	P52597	415 aa	Known RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	MTTP	P55157	894 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	RAB38	P57729	211 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	MRPL49	Q13405	166 aa	Known RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	UBAP2L	Q14157	1087 aa	Known RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	NR6A1	Q15406	480 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	ABHD17B	Q5VST6	288 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	FCRLB	Q6BAA4	426 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	HIST2H2AA3	Q6FI13	130 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	GRHL2	Q6ISB3	625 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	H3F3C	Q6NXT2	135 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	TRIM40	Q6P9F5	258 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	ZNF793	Q6ZN11	406 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	GOLGA7	Q7Z5G4	137 aa		11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	GSPT2	Q8IYD1	628 aa	Known RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.03	□□□□□ -0.64
PSMC3-205	ENST00000528362	FAM47B	Q8NA70	645 aa		11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms