RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 CHST8Q9H2A9 424 aa17.73■□□□□ 0.43
PTPRK-218ENST00000525459 TNFRSF12AQ9NP84 129 aa17.73■□□□□ 0.43
PTPRK-218ENST00000525459 ZNF282Q9UDV7 671 aaPredicted RBP17.73■□□□□ 0.43
PTPRK-218ENST00000525459 ADAM29Q9UKF5 820 aa17.73■□□□□ 0.43
PTPRK-218ENST00000525459 CCDC88CQ9P219 2028 aa17.73■□□□□ 0.43
PTPRK-218ENST00000525459 IGLV3-12A0A075B6K2 115 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 NPIPB8E9PQR5 432 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 SLCO1B7G3V0H7 640 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 PLPP1O14494 284 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 RGS14O43566 566 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 TLX3O43711 291 aaPredicted RBP17.72■□□□□ 0.43
PTPRK-218ENST00000525459 RSL1D1O76021 490 aaKnown RBP17.72■□□□□ 0.43
PTPRK-218ENST00000525459 TCN2P20062 427 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 ITGAXP20702 1163 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 HTR6P50406 440 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 RPS15P62841 145 aaKnown RBP17.72■□□□□ 0.43
PTPRK-218ENST00000525459 OCRLQ01968 901 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 OCA2Q04671 838 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 CLN3Q13286 438 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 OR4C11Q6IEV9 310 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 OVCH1Q7RTY7 1134 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 PDSS2Q86YH6 399 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 ZCCHC7Q8N3Z6 543 aaKnown RBP17.72■□□□□ 0.43
PTPRK-218ENST00000525459 ZNF781Q8N8C0 355 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 AMER3Q8N944 861 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 ACPTQ9BZG2 426 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 ZDHHC2Q9UIJ5 367 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 FIS1Q9Y3D6 152 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 PCDHGA6Q9Y5G7 932 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 C1QTNF9BB2RNN3 333 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 RDH16O75452 317 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 APC2O95996 2303 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 CYC1P08574 325 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 C1QTNF9P0C862 333 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 HIST1H1TP22492 207 aaPredicted RBP17.72■□□□□ 0.43
PTPRK-218ENST00000525459 PRPH2P23942 346 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 DLSTP36957 453 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 OR1D4P47884 311 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 BTN3A2P78410 334 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 DNASE1L3Q13609 305 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 MRPL14Q6P1L8 145 aaKnown RBP17.72■□□□□ 0.43
PTPRK-218ENST00000525459 PRSS41Q7RTY9 318 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 METTL4Q8N3J2 472 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 RNF175Q8N4F7 328 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 METTL27Q8N6F8 245 aaPredicted RBP17.72■□□□□ 0.43
PTPRK-218ENST00000525459 AGR3Q8TD06 166 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 CT55Q8WUE5 264 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 ZCCHC14Q8WYQ9 949 aaKnown RBP17.72■□□□□ 0.43
PTPRK-218ENST00000525459 OR1F2PQ96R84 312 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 TGIF2Q9GZN2 237 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 C20orf27Q9GZN8 174 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 DDX31Q9H8H2 851 aaKnown RBP17.72■□□□□ 0.43
PTPRK-218ENST00000525459 GPN2Q9H9Y4 310 aaPredicted RBP17.72■□□□□ 0.43
PTPRK-218ENST00000525459 PRDM7Q9NQW5 492 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 MAU2Q9Y6X3 613 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 SPACA6W5XKT8 324 aa17.72■□□□□ 0.43
PTPRK-218ENST00000525459 C4orf51C9J302 202 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 SGK494L7N484 410 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 ETHE1O95571 254 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 SERPINB3P29508 390 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 UGT3A2Q3SY77 523 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 COX15Q7KZN9 410 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 PROSER1Q86XN7 944 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 CRLF3Q8IUI8 442 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 DDIASQ8IXT1 998 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 HBEGFQ99075 208 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 LYRM4Q9HD34 91 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 RIC8BQ9NVN3 520 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 LYARQ9NX58 379 aaKnown RBP17.71■□□□□ 0.43
PTPRK-218ENST00000525459 MS4A12Q9NXJ0 267 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 TRPC4Q9UBN4 977 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 CROTQ9UKG9 612 aa17.71■□□□□ 0.43
PTPRK-218ENST00000525459 ARHGAP10A1A4S6 786 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 BLACEA4D250 179 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 TMEM233B4DJY2 109 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 RNH1P13489 461 aaKnown RBP17.7■□□□□ 0.42
PTPRK-218ENST00000525459 JAK1P23458 1154 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 ATP5A1P25705 553 aaKnown RBP17.7■□□□□ 0.42
PTPRK-218ENST00000525459 EIF2S3P41091 472 aaKnown RBP17.7■□□□□ 0.42
PTPRK-218ENST00000525459 GSTM5P46439 218 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 ACSM2AQ08AH3 577 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 ACSM2BQ68CK6 577 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 ATG14Q6ZNE5 492 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 UBE3DQ7Z6J8 389 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 ACOT4Q8N9L9 421 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 PIWIL2Q8TC59 973 aaKnown RBP17.7■□□□□ 0.42
PTPRK-218ENST00000525459 MRPL1Q9BYD6 325 aaKnown RBP17.7■□□□□ 0.42
PTPRK-218ENST00000525459 SLC22A11Q9NSA0 550 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 SIRT5Q9NXA8 310 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 VTI1BQ9UEU0 232 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 PHF11Q9UIL8 331 aa17.7■□□□□ 0.42
PTPRK-218ENST00000525459 MRPS33Q9Y291 106 aaKnown RBP17.7■□□□□ 0.42
PTPRK-218ENST00000525459 SYNDIG1LA6NDD5 238 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 PSMD12O00232 456 aaPredicted RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 SAP18O00422 153 aaKnown RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 TERTO14746 1132 aaKnown RBP17.69■□□□□ 0.42
PTPRK-218ENST00000525459 PCDH17O14917 1159 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 SH3BGRLO75368 114 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 CERS1P27544 350 aa17.69■□□□□ 0.42
PTPRK-218ENST00000525459 BSGP35613 385 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms