RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PAPD4Q6PIY7 484 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 RIPOR1Q6ZS17 1223 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 CCDC91Q7Z6B0 441 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 GSPT2Q8IYD1 628 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 RNF175Q8N4F7 328 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 RHEBL1Q8TAI7 183 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 PPP4R1Q8TF05 950 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 UBTD2Q8WUN7 234 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 WDR34Q96EX3 536 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 SCYL1Q96KG9 808 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 QRFPRQ96P65 431 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 PITHD1Q9GZP4 211 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 REXO4Q9GZR2 422 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 NECTIN3Q9NQS3 549 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 COPG2Q9UBF2 871 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 NTNG1Q9Y2I2 539 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 ANGPTL3Q9Y5C1 460 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 PCDHGA10Q9Y5H3 936 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 COPG1Q9Y678 874 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 MYO18BQ8IUG5 2567 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 TCP11X1B4DZS4 312 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 PRMT3O60678 531 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 KRT38O76015 456 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 SIX3O95343 332 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 EPB42P16452 691 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 GSTM2P28161 218 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 SERPINB9P50453 376 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 ZNF33BQ06732 778 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 MRPL49Q13405 166 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 ZNF169Q14929 603 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 SETDB1Q15047 1291 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 TBCCQ15814 346 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 TECRLQ5HYJ1 363 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 PLAG1Q6DJT9 500 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 TAOK1Q7L7X3 1001 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 MYLK4Q86YV6 388 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 GALNT11Q8NCW6 608 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 OR2L5Q8NG80 312 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 OR1N1Q8NGS0 311 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 LPAR4Q99677 370 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 CLK4Q9HAZ1 481 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 KCNK13Q9HB14 408 aa12.07□□□□□ -0.48
TRAPPC4-205ENST00000525079 EXOC1LA0A1B0GW35 172 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 DYTNA2CJ06 578 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 SAP18O00422 153 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 RTCAO00442 366 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 B3GALT2O43825 422 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 KLK8O60259 260 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 WDPCPO95876 746 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 TGFB1P01137 390 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 CERS1P27544 350 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 CASP2P42575 452 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 MAGEA12P43365 314 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 HNRNPFP52597 415 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 ALDH18A1P54886 795 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 SRSF1Q07955 248 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 DDX39BQ13838 428 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 NAA30Q147X3 362 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 TLR1Q15399 786 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 ADPRMQ3LIE5 342 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 ABHD17BQ5VST6 288 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 MED27Q6P2C8 311 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 TRIM40Q6P9F5 258 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 ABHD17CQ6PCB6 329 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 QSOX2Q6ZRP7 698 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 GOLGA7Q7Z5G4 137 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 UBE3DQ7Z6J8 389 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 PTGR2Q8N8N7 351 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 FAM47BQ8NA70 645 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 TMEM52Q8NDY8 209 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 OR7G3Q8NG95 312 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 ZNF473Q8WTR7 871 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 ISL2Q96A47 359 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 PHF21BQ96EK2 531 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 SEC16BQ96JE7 1060 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 MS4A8Q9BY19 250 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 COPS7BQ9H9Q2 264 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 PRDM9Q9NQV7 894 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 PRDM7Q9NQW5 492 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 STMN3Q9NZ72 180 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 ZNF180Q9UJW8 692 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 SHANK1Q9Y566 2161 aa12.06□□□□□ -0.48
TRAPPC4-205ENST00000525079 MYOCOSA0A1B0GUC4 107 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 RIPK2O43353 540 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 MAN1A2O60476 641 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 SNRPAP09012 282 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 RBP1P09455 135 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 GCAP28676 217 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 EEF1DP29692 281 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 MTTPP55157 894 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 RAB38P57729 211 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 SLC26A5P58743 744 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 AP2B1P63010 937 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 GTF2H2Q13888 395 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 UBAP2LQ14157 1087 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 E2F2Q14209 437 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 NR6A1Q15406 480 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 EXT1Q16394 746 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 EIF2S3LQ2VIR3 472 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms