RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SORDQ00796 357 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 MYL7Q01449 175 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 TSPY1Q01534 308 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 SEMG2Q02383 582 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 SP4Q02446 784 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.48□□□□□ -2.17
CD44-212ENST00000524922 GOLGA8DPQ0D2H9 430 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 PRPF4BQ13523 1007 aaKnown RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 PEX6Q13608 980 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ITGA9Q13797 1035 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 FGFBP1Q14512 234 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ZNF235Q14590 738 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 NR1D2Q14995 579 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 INAQ16352 499 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 CTU2Q2VPK5 515 aaKnown RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 ZFP69Q49AA0 526 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 SLC9B1Q4ZJI4 515 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 LACTB2Q53H82 288 aaPredicted RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 ADAMTSL4-AS1Q5T5F5 129 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 CYB5D1Q6P9G0 228 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 C4orf50Q6ZRC1 276 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 STXBP4Q6ZWJ1 553 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 DPPA4Q7L190 304 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 BIVMQ86UB2 503 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 HEATR4Q86WZ0 1026 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ITPRIPQ8IWB1 547 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ALLCQ8N6M5 410 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 LRRC52Q8N7C0 313 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 AMER3Q8N944 861 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 STKLD1Q8NE28 680 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 CCDC112Q8NEF3 446 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 DENND6BQ8NEG7 585 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 OR2T34Q8NGX1 318 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 OR2T3Q8NH03 318 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 APOBEC4Q8WW27 367 aaKnown RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 PRCCQ92733 491 aaPredicted RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 CCDC127Q96BQ5 260 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 SIPA1Q96FS4 1042 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 CEP170P1Q96L14 293 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ZNF560Q96MR9 790 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 PKMYT1Q99640 499 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 FOXC2Q99958 501 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 RBM4BQ9BQ04 359 aaKnown RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 STRADBQ9C0K7 418 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 INTS2Q9H0H0 1204 aaKnown RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 RPF1Q9H9Y2 349 aaKnown RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 PREBQ9HCU5 417 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 TM9SF3Q9HD45 589 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 XPNPEP1Q9NQW7 623 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ZNF71Q9NQZ8 489 aaPredicted RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 SPHK2Q9NRA0 654 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ACSS1Q9NUB1 689 aaPredicted RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 MIOSQ9NXC5 875 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 GDAP2Q9NXN4 497 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 IL37Q9NZH6 218 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 C5AR2Q9P296 337 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ABI3Q9P2A4 366 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 MARCH4Q9P2E8 410 aaPredicted RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 APPL1Q9UKG1 709 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 A4GNTQ9UNA3 340 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ERVK-11Q9UQG0 969 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 PKDREJQ9NTG1 2253 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 MED13LQ71F56 2210 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 CUBNO60494 3623 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 MEGF8Q7Z7M0 2845 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 DCHS2Q6V1P9 2916 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 UBE4BO95155 1302 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 ITIH6Q6UXX5 1313 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 THADAQ6YHU6 1953 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CACNA1DQ01668 2161 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 A0A0D9SFI3 127 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 hCG_1642624A0A1W2PR95 340 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 TTC26A0AVF1 554 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 NDUFAF8A1L188 74 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 OR5K3A6NET4 321 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 SMCO2A6NFE2 343 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CASTOR2A6NHX0 329 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 B4E171 279 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 C21orf140B9A014 251 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 D6RAR5 112 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 PRAMEF26H0Y7S4 382 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 MKRN2OSH3BPM6 223 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 TLR4O00206 839 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 PIRO00625 290 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 TOX3O15405 576 aaPredicted RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 KCNN4O15554 427 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 SPINT2O43291 252 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 FAM189A1O60320 539 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 TMCC2O75069 709 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 CSO75390 466 aaKnown RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 CEACAM4O75871 244 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 PDE9AO76083 593 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 RTN3O95197 1032 aaPredicted RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 SIX3O95343 332 aaPredicted RBP1.47□□□□□ -2.17
CD44-212ENST00000524922 SEMA4FO95754 770 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 IGHEP01854 428 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 IGHDP01880 384 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 EDN1P05305 212 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 IGHV4-34P06331 123 aa1.47□□□□□ -2.17
CD44-212ENST00000524922 TPOP07202 933 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms