RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SH2D5Q6ZV89 423 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 C5orf24Q7Z6I8 188 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 LSMEM2Q8N112 164 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 LEMD2Q8NC56 503 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 TRPV3Q8NET8 790 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 GPRC5AQ8NFJ5 357 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR5AP2Q8NGF4 316 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR10G8Q8NGN5 311 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 BPIFA2Q96DR5 249 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 SAMD8Q96LT4 415 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 IL12RB2Q99665 862 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 SSX3Q99909 188 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 PIGQQ9BRB3 760 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 UBAC1Q9BSL1 405 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 ATP13A3Q9H7F0 1226 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 MAN2C1Q9NTJ4 1040 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 C2orf42Q9NWW7 574 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 POLKQ9UBT6 870 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 PLEKHA6Q9Y2H5 1048 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 PPP2R2CQ9Y2T4 447 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 KIAA1217Q5T5P2 1943 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 A0A087WZ39 114 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 ATP6AP2A0A1C7CYW4 349 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 SLCO1B7G3V0H7 640 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 KCNAB3O43448 404 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 PCDH7O60245 1069 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 KHDRBS3O75525 346 aaKnown RBP4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 AP2A2O94973 939 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 CHRNGP07510 517 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 ODC1P11926 461 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 RPL35AP18077 110 aaKnown RBP4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 FCARP24071 287 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 CTNNA2P26232 953 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 CAMLGP49069 296 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 GMFBP60983 142 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 SPHARQ15513 63 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 DUSP5Q16690 384 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 EPC2Q52LR7 807 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 DNAJC21Q5F1R6 531 aaKnown RBP4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 ARHGEF16Q5VV41 709 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 SNRNP48Q6IEG0 339 aaKnown RBP4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 CEACAM20Q6UY09 585 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 C17orf107Q6ZR85 190 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 SLC26A9Q7LBE3 791 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR10V1Q8NGI7 309 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 CD99L2Q8TCZ2 262 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 U2AF1L4Q8WU68 220 aaKnown RBP4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 UBTD2Q8WUN7 234 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 ZNF524Q96C55 264 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 MRPL38Q96DV4 380 aaKnown RBP4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 PCDHB18PQ96TA0 734 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 S1PR3Q99500 378 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 ATG10Q9H0Y0 220 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 EPHA6Q9UF33 1036 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 PILRAQ9UKJ1 303 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 ATP6V0A2Q9Y487 856 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 ETV7Q9Y603 341 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 CLCA3PQ9Y6N3 262 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 UBE4BO95155 1302 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 STK36Q9NRP7 1315 aa4.68□□□□□ -1.66
HMGB1P46-201ENST00000520062 BLOC1S5-TXNDC5H3BN57 136 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 SLC1A7O00341 560 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 CHEK1O14757 476 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 MLNRO43193 412 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 NME2P1O60361 137 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 CDC123O75794 336 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR6A2O95222 327 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 CPNE6O95741 557 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 TGFAP01135 160 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 EPOP01588 193 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 UMODP07911 640 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 ACKR3P25106 362 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 CCND2P30279 289 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR1D2P34982 312 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 LBX1P52954 281 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 PHEXP78562 749 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 MFGE8Q08431 387 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 CNTN1Q12860 1018 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 MEF2DQ14814 521 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 KRT31Q15323 416 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 ATP1A1-AS1Q5TC04 95 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR6B2Q6IFH4 312 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 OLFM4Q6UX06 510 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 FAM43BQ6ZT52 329 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 TCEANCQ8N8B7 351 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 TRIM58Q8NG06 486 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR13C5Q8NGS8 318 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 CHURC1Q8WUH1 139 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 GLYATL1Q969I3 302 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 SLC35C1Q96A29 364 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 C16orf45Q96MC5 204 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 NEDD4LQ96PU5 975 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 FTHL17Q9BXU8 183 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 GANQ9H2C0 597 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 MTIF3Q9H2K0 278 aaKnown RBP4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 DCLRE1BQ9H816 532 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 HOMER3Q9NSC5 361 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 DBF4Q9UBU7 674 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 C2CD2Q9Y426 696 aa4.67□□□□□ -1.66
HMGB1P46-201ENST00000520062 SPATA31D1Q6ZQQ2 1576 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms