RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 GRK3P35626 688 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 TNFSF10P50591 281 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 CSNK1G2P78368 415 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 STX3Q13277 289 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 PCOLCEQ15113 449 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 INAQ16352 499 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 GALNTL6Q49A17 601 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 FAAH2Q6GMR7 532 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 TMEM214Q6NUQ4 689 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 PAQR3Q6TCH7 311 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 FAM180AQ6UWF9 173 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 LCTLQ6UWM7 567 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 ZC3HC1Q86WB0 502 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 SPNS2Q8IVW8 549 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 CATSPER1Q8NEC5 780 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 ARMC2Q8NEN0 867 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 OR9A4Q8NGU2 314 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 RDH11Q8TC12 318 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 METTL21AQ8WXB1 218 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 IMMP1LQ96LU5 166 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 TSNARE1Q96NA8 513 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 GPR22Q99680 433 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 SLX1AQ9BQ83 275 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 SGPP1Q9BX95 441 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 RNF32Q9H0A6 362 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 C19orf25Q9UFG5 118 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 CORO1CQ9ULV4 474 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 NOTCH2Q04721 2471 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 A1L4Q6 167 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 PABPN1LA6NDY0 278 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 PLIN3O60664 434 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 HNRNPCL1O60812 293 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 H2AFYO75367 372 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 SNUPNO95149 360 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 BCL6P41182 706 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 CDKN2DP55273 166 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 AP1S2P56377 157 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 IL2P60568 153 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 MAT1AQ00266 395 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 POU4F1Q01851 419 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 NAE1Q13564 534 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 RBM20Q5T481 1227 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 HIST2H2BCQ6DN03 193 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 CAPN13Q6MZZ7 669 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 FAM47EQ6ZV65 393 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 ASPGQ86U10 573 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 CRLF3Q8IUI8 442 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 SIRT6Q8N6T7 355 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 BCORP1Q8N888 145 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 OR51Q1Q8NH59 317 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 LINGO1Q96FE5 620 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 TSPAN17Q96FV3 270 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 LRRC37BQ96QE4 947 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 HAUS8Q9BT25 410 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 SARGQ9BW04 601 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 TRIM54Q9BYV2 358 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 ATG10Q9H0Y0 220 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 ANKHQ9HCJ1 492 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 SNX15Q9NRS6 342 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 OLAHQ9NV23 265 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 ACOT9Q9Y305 439 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 PSAT1Q9Y617 370 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 SLC22A7Q9Y694 548 aa11.76□□□□□ -0.53
TRAPPC9-206ENST00000519482 A0A096LPK6 155 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 CFAP73A6NFT4 308 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 LCMT2O60294 686 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 CLDN1O95832 211 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 TSPAN12O95859 305 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 PROCP04070 461 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 C2P06681 752 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 ENO2P09104 434 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 SLC35G6P0C7Q6 338 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 ITGAMP11215 1152 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 CPA3P15088 417 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 NPPBP16860 134 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 IL1RNP18510 177 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 IL10P22301 178 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 XCR1P46094 333 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 AGTR2P50052 363 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 EFNA3P52797 238 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 PER3P56645 1201 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 SNRPNP63162 240 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 ASPHQ12797 758 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 BNIP1Q12981 228 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 ZKSCAN8Q15776 578 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 PHKG1Q16816 387 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 FAM45BPQ6NSW5 357 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 CGB2Q6NT52 195 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 MBOAT1Q6ZNC8 495 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 CPEB2Q7Z5Q1 589 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 MFSD9Q8NBP5 474 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 PPP1R14CQ8TAE6 165 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 FAM45AQ8TCE6 357 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 SLC13A3Q8WWT9 602 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 ATL1Q8WXF7 558 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 VPS39Q96JC1 886 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 VN1R1Q9GZP7 353 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 SLCO1B3Q9NPD5 702 aa11.75□□□□□ -0.53
TRAPPC9-206ENST00000519482 SAR1AQ9NR31 198 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms