RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 KCTD7Q96MP8 289 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 RTP3Q9BQQ7 232 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 SLC28A3Q9HAS3 691 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 SP110Q9HB58 689 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 SLC25A19Q9HC21 320 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 ZFP64Q9NPA5 681 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 FANCFQ9NPI8 374 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 IFT46Q9NQC8 304 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 ADAM30Q9UKF2 790 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 MAB21L2Q9Y586 359 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 SMIM28A0A1B0GU29 152 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 E9PAM4 449 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 J3KR12 359 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 MANBAO00462 879 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 RECQL4O94761 1208 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 GLUD1P00367 558 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 IFNA14P01570 189 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 EBLN1P0CF75 366 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 ACPPP15309 386 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 ENGP17813 658 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 PSMA3P25788 255 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 STOMP27105 288 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 PRKAR1BP31321 381 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 CDKN2CP42773 168 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 TTPAP49638 278 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 HMGCS2P54868 508 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 LILRA4P59901 499 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 SNRPGP62308 76 aaKnown RBP12.32□□□□□ -0.44
SMAD1-215ENST00000515385 SLC10A7Q0GE19 358 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 ZNF273Q14593 569 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 ZNF730Q6ZMV8 503 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 SYNPOQ8N3V7 929 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 NANOGP1Q8N7R0 232 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 SIDT2Q8NBJ9 832 aaKnown RBP12.32□□□□□ -0.44
SMAD1-215ENST00000515385 FAM46DQ8NEK8 389 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 USP7Q93009 1102 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 HGDQ93099 445 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 SGTBQ96EQ0 304 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 KLHL15Q96M94 604 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 GFM1Q96RP9 751 aaKnown RBP12.32□□□□□ -0.44
SMAD1-215ENST00000515385 PELOQ9BRX2 385 aaKnown RBP12.32□□□□□ -0.44
SMAD1-215ENST00000515385 GSX2Q9BZM3 304 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 POLR2J2Q9GZM3 115 aaKnown RBP12.32□□□□□ -0.44
SMAD1-215ENST00000515385 SHARPINQ9H0F6 387 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 MED9Q9NWA0 146 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 MPP6Q9NZW5 540 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 RAB23Q9ULC3 237 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 OGDHLQ9ULD0 1010 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 CORO2BQ9UQ03 480 aa12.32□□□□□ -0.44
SMAD1-215ENST00000515385 COL4A4P53420 1690 aaPredicted RBP12.32□□□□□ -0.44
SMAD1-215ENST00000515385 A0A1B0GVI7 797 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 MOXD2PA6NHM9 499 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 ZAR1LA6NP61 321 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 KRBOX1C9JBD0 128 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 F8W810 466 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 SNAPC5O75971 98 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 CTPS1P17812 591 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 C4BPBP20851 252 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 KELP23276 732 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 PPIBP23284 216 aaKnown RBP12.31□□□□□ -0.44
SMAD1-215ENST00000515385 APEX1P27695 318 aaKnown RBP12.31□□□□□ -0.44
SMAD1-215ENST00000515385 ATP12AP54707 1039 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 HMGCS1Q01581 520 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 UBE3AQ05086 875 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 ELOAQ14241 798 aaKnown RBP12.31□□□□□ -0.44
SMAD1-215ENST00000515385 PCBP1Q15365 356 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMAD1-215ENST00000515385 ZNF284Q2VY69 593 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 FLYWCH1Q4VC44 716 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 CD276Q5ZPR3 534 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 NOTUMQ6P988 496 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 TFAP2EQ6VUC0 442 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 LGI4Q8N135 537 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 MYLPFQ96A32 169 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 HHIPQ96QV1 700 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 P2RY13Q9BPV8 354 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 NTMT1Q9BV86 223 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 CRTAC1Q9NQ79 661 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 RDH8Q9NYR8 311 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 CACNG2Q9Y698 323 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 hCG_1807616A0A1W2PRN6 198 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 C7orf66A4D0T2 115 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 ARRDC5A6NEK1 342 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 STK25O00506 426 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 WNT10BO00744 389 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 PLOD3O60568 738 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 IGHA2P01877 340 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 ADRA2AP08913 450 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 SLC10A3P09131 477 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 RAB3AP20336 220 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 HOXA11P31270 313 aaPredicted RBP12.31□□□□□ -0.44
SMAD1-215ENST00000515385 PBX3P40426 434 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 LHX1P48742 406 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 ZNF140P52738 457 aaPredicted RBP12.31□□□□□ -0.44
SMAD1-215ENST00000515385 MXD1Q05195 221 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 MTAPQ13126 283 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 RPA4Q13156 261 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 SLC14A1Q13336 389 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 BTN1A1Q13410 526 aa12.31□□□□□ -0.44
SMAD1-215ENST00000515385 PTPRCAPQ14761 206 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms