RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PSD4Q8NDX1 1056 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 NFAM1Q8NET5 270 aaPredicted RBP8.46□□□□□ -1.06
NUP54-211ENST00000512151 HMGCLL1Q8TB92 370 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 SMPDL3BQ92485 455 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 RAB11FIP5Q9BXF6 653 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 PLA2G12AQ9BZM1 189 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 GSX2Q9BZM3 304 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 YAE1D1Q9NRH1 226 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 PCYOX1Q9UHG3 505 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 RSPH14Q9UHP6 348 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 MGAM2Q2M2H8 2515 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 NCKAP5O14513 1909 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 SVEP1Q4LDE5 3571 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 HEATR5AQ86XA9 2040 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 GOLGA6L10A0A0M3HER8 536 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 ATP6AP2A0A1C7CYW4 349 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 IQCF5A8MTL0 148 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 MAGEB17A8MXT2 336 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 FAM47E-STBD1D6RA91 191 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 H7C0S8 307 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 ACOT7O00154 380 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 FCHO1O14526 889 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 HAT1O14929 419 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 RAD51CO43502 376 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 VPS26AO75436 327 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 RDH16O75452 317 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 ATP6AP2O75787 350 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 NSA2O95478 260 aaKnown RBP8.45□□□□□ -1.06
NUP54-211ENST00000512151 C1orf105O95561 183 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 KRT14P02533 472 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 H2AFXP16104 143 aaPredicted RBP8.45□□□□□ -1.06
NUP54-211ENST00000512151 CMPK1P30085 196 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 BCL6P41182 706 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 MAN2A2P49641 1150 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 SORDQ00796 357 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 ACKR1Q16570 336 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 CCDC38Q502W7 563 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 WLSQ5T9L3 541 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 KIAA0930Q6ICG6 404 aaPredicted RBP8.45□□□□□ -1.06
NUP54-211ENST00000512151 SUSD1Q6UWL2 747 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 PCGF5Q86SE9 256 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 CEP112Q8N8E3 955 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 IGFBPL1Q8WX77 278 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 LRRC46Q96FV0 321 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 DACH2Q96NX9 599 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 PIGQQ9BRB3 760 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 WDR83Q9BRX9 315 aaKnown RBP8.45□□□□□ -1.06
NUP54-211ENST00000512151 LRRC1Q9BTT6 524 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 EPB41L4BQ9H329 900 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 UBTD1Q9HAC8 227 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 TIMMDC1Q9NPL8 285 aa8.45□□□□□ -1.06
NUP54-211ENST00000512151 SEMA4BQ9NPR2 832 aaPredicted RBP8.45□□□□□ -1.06
NUP54-211ENST00000512151 C6orf203Q9P0P8 240 aaPredicted RBP8.45□□□□□ -1.06
NUP54-211ENST00000512151 ZNF223Q9UK11 482 aaPredicted RBP8.45□□□□□ -1.06
NUP54-211ENST00000512151 SH3D21A4FU49 640 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 DEFB108AA8MXU0 73 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 PRKNO60260 465 aaPredicted RBP8.44□□□□□ -1.06
NUP54-211ENST00000512151 SUSD5O60279 629 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 ITGA10O75578 1167 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 IFNB1P01574 187 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 RPN2P04844 631 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 IVDP26440 423 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 PSMB4P28070 264 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 FOXN2P32314 431 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 GEMP55040 296 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 MPP1Q00013 466 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 FOXO1Q12778 655 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 SPARCL1Q14515 664 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 ITIH4Q14624 930 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 NDUFA9Q16795 377 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 P3H1Q32P28 736 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 CHRFAM7AQ494W8 412 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 RGS9BPQ6ZS82 235 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 GSTA5Q7RTV2 222 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 VN1R4Q7Z5H5 301 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 SLC22A16Q86VW1 577 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 KLHDC8BQ8IXV7 354 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 CYP4X1Q8N118 509 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 FAM109AQ8N4B1 249 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 MMGT1Q8N4V1 131 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 TMEM156Q8N614 296 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 OR5T3Q8NGG3 340 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 RERGQ96A58 199 aaPredicted RBP8.44□□□□□ -1.06
NUP54-211ENST00000512151 SARAFQ96BY9 339 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 PEX11GQ96HA9 241 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 CDKN2AIPNLQ96HQ2 116 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 VAT1Q99536 393 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 C19orf43Q9BQ61 176 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 DEFB126Q9BYW3 111 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 GBA3Q9H227 469 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 LIN28AQ9H9Z2 209 aaKnown RBP8.44□□□□□ -1.06
NUP54-211ENST00000512151 ETNK1Q9HBU6 452 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 MRPS30Q9NP92 439 aaKnown RBP8.44□□□□□ -1.06
NUP54-211ENST00000512151 NLE1Q9NVX2 485 aaPredicted RBP8.44□□□□□ -1.06
NUP54-211ENST00000512151 JKAMPQ9P055 326 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.44□□□□□ -1.06
NUP54-211ENST00000512151 TRHDEQ9UKU6 1024 aa8.44□□□□□ -1.06
NUP54-211ENST00000512151 V9GYY5 206 aaPredicted RBP8.44□□□□□ -1.06
NUP54-211ENST00000512151 TRBV11-1A0A0K0K1C0 115 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms