RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	EML4	Q9HC35	981 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	PSD3	Q9NYI0	1048 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	CTSF	Q9UBX1	484 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	ACSL6	Q9UKU0	697 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	ANGPTL2	Q9UKU9	493 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	PPT2	Q9UMR5	302 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	MRPS18B	Q9Y676	258 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	SLC22A7	Q9Y694	548 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107		A0A0A6YYD5	115 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	ATP6AP2	A0A1C7CYW4	349 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	ARHGAP10	A1A4S6	786 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	SDHD	O14521	159 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	CRCP	O75575	148 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	ATP6AP2	O75787	350 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	PTX3	P26022	381 aa	Predicted RBP	13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	GSTM2	P28161	218 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	TPP2	P29144	1249 aa	Predicted RBP	13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	HNRNPH2	P55795	449 aa	Known RBP	13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	RPS18	P62269	152 aa	Known RBP	13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.77	□□□□□ -0.21	2e-8	■■□□□ 13.7
MATR3-238	ENST00000512107	CSTF3	Q12996	717 aa	Known RBP	13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	CLN3	Q13286	438 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	CUL3	Q13618	768 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	FAM53B	Q14153	422 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	PRSS53	Q2L4Q9	553 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	MUM1	Q2TAK8	710 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	NKAIN1	Q4KMZ8	207 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	ATG16L1	Q676U5	607 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	RNF165	Q6ZSG1	346 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	VASH2	Q86V25	355 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	LAPTM4B	Q86VI4	370 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	TRIM42	Q8IWZ5	723 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	C1orf52	Q8N6N3	182 aa	Known RBP	13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	SREK1	Q8WXA9	508 aa	Known RBP	13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	NAF1	Q96HR8	494 aa	Known RBP	13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	SEC16B	Q96JE7	1060 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	LRFN5	Q96NI6	719 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	MAPKAP1	Q9BPZ7	522 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	RBCK1	Q9BYM8	510 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	NUF2	Q9BZD4	464 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	KCMF1	Q9P0J7	381 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	ASPM	Q8IZT6	3477 aa		13.77	□□□□□ -0.21
MATR3-238	ENST00000512107	NUP210L	Q5VU65	1888 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	TXNDC9	O14530	226 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	LSM1	O15116	133 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	POLR3G	O15318	223 aa	Predicted RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	EFS	O43281	561 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	CHST10	O43529	356 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	EDF1	O60869	148 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	SCEL	O95171	688 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	NSA2	O95478	260 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	SERPINB1	P30740	379 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	HK2	P52789	917 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	ARSF	P54793	590 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	STXBP1	P61764	594 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	FAM214A	Q32MH5	1076 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	SLC9B1	Q4ZJI4	515 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	RFTN2	Q52LD8	501 aa	Predicted RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	TMEM35A	Q53FP2	167 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	VWA2	Q5GFL6	755 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	OR4C11	Q6IEV9	310 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	MRM1	Q6IN84	353 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	MRPL14	Q6P1L8	145 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	SHISA6	Q6ZSJ9	500 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	COMMD6	Q7Z4G1	85 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	ZC3H7A	Q8IWR0	971 aa	Known RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	DDIAS	Q8IXT1	998 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	LRRC34	Q8IZ02	419 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	ARFGAP2	Q8N6H7	521 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	ACOT4	Q8N9L9	421 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	RFWD2	Q8NHY2	731 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	MR1	Q95460	341 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	C7orf26	Q96N11	449 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	ZNF578	Q96N58	590 aa	Predicted RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	SERPINI1	Q99574	410 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	EBPL	Q9BY08	206 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	CCDC134	Q9H6E4	229 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	BRF2	Q9HAW0	419 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	ANKH	Q9HCJ1	492 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	ZNF304	Q9HCX3	659 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	TXLNG	Q9NUQ3	528 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	IL17B	Q9UHF5	180 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	ADGRE2	Q9UHX3	823 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	CROT	Q9UKG9	612 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	SRPK3	Q9UPE1	567 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	DLGAP4	Q9Y2H0	992 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	ASB4	Q9Y574	426 aa		13.76	□□□□□ -0.21
MATR3-238	ENST00000512107	TGFBR3L	H3BV60	316 aa		13.75	□□□□□ -0.21
MATR3-238	ENST00000512107	KLK1	P06870	262 aa		13.75	□□□□□ -0.21
MATR3-238	ENST00000512107	PRR35	P0CG20	571 aa		13.75	□□□□□ -0.21
MATR3-238	ENST00000512107	HIST1H1T	P22492	207 aa	Predicted RBP	13.75	□□□□□ -0.21
MATR3-238	ENST00000512107	TACR1	P25103	407 aa		13.75	□□□□□ -0.21
MATR3-238	ENST00000512107	STAT5A	P42229	794 aa		13.75	□□□□□ -0.21

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