RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CHRNA4P43681 627 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACOT2P49753 483 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 EFNA5P52803 228 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 PPP2R2BQ00005 443 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 KCNMA1Q12791 1236 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 LSM12Q3MHD2 195 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 EOGTQ5NDL2 527 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 TCHHL1Q5QJ38 904 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 NT5DC1Q5TFE4 455 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 CDKAL1Q5VV42 579 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 MRNIPQ6NTE8 343 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC27A1Q6PCB7 646 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 PODNL1Q6PEZ8 512 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM108Q6UXF1 575 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 MED25Q71SY5 747 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 LIMS2Q7Z4I7 341 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 GPR180Q86V85 440 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 TICAM1Q8IUC6 712 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 C1orf210Q8IVY1 113 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 LINC00518Q8N0U6 118 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM58AQ8N1B3 248 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM130Q8N3G9 435 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF516Q92618 1163 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 ULK4Q96C45 1275 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 ANKRD36BP1Q96IX9 119 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 OLFM3Q96PB7 478 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 VPS35Q96QK1 796 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 MED15Q96RN5 788 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 BCL2L14Q9BZR8 327 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 WWP1Q9H0M0 922 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR52A5Q9H2C5 316 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 FZD8Q9H461 694 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 PDZD7Q9H5P4 517 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 ROPN1Q9HAT0 212 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACSS2Q9NR19 701 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 TLR9Q9NR96 1032 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 RGS18Q9NS28 235 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 OLAHQ9NV23 265 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAIMQ9NVQ4 179 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 CLEC2DQ9UHP7 191 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 NAGKQ9UJ70 344 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 CRLS1Q9UJA2 301 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 DNMT3LQ9UJW3 386 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 PSMD13Q9UNM6 376 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A0U1RQF3 1178 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRR23AA6NEV1 266 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 B8ZZF3 427 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 NPIPA2E9PIF3 369 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 MATN2O00339 956 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 MDM4O15151 490 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 INPPL1O15357 1258 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SUV39H1O43463 412 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PI15O43692 258 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 LIASO43766 372 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRICKLE3O43900 615 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SELENOFO60613 162 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SERPINB7O75635 380 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 WDR47O94967 919 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TRUB2O95900 331 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TCF4P15884 667 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACADSP16219 412 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 MALP21145 153 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TGM2P21980 687 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 AZGP1P25311 298 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 HTR7P34969 479 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 NAA10P41227 235 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TNFSF9P41273 254 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CYP2J2P51589 502 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 NCKAP1LP55160 1127 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SIM1P81133 766 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 IRF8Q02556 426 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TARDBPQ13148 414 aaKnown RBP eCLIP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 MRPL49Q13405 166 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 RAB32Q13637 225 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF268Q14587 947 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SSX2Q16385 188 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 AP5B1Q2VPB7 878 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CBWD5Q5RIA9 395 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 HES5Q5TA89 166 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 C1orf146Q5VVC0 180 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 KHDRBS2Q5VWX1 349 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLFN12LQ6IEE8 588 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM26Q6ZUK4 368 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF720Q7Z2F6 126 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 IRF2BP1Q8IU81 584 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 MCUQ8NE86 351 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 ENGASEQ8NFI3 743 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 HCAR2Q8TDS4 363 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 ESAMQ96AP7 390 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PHF21AQ96BD5 680 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 DGCR14Q96DF8 476 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 MCRS1Q96EZ8 462 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 MAP6Q96JE9 813 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 C16orf92Q96LL3 132 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PCDHB18PQ96TA0 734 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SCNM1Q9BWG6 230 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 JAM3Q9BX67 310 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 WDR55Q9H6Y2 383 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CATSPERBQ9H7T0 1116 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 C20orf96Q9NUD7 363 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms