RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 IRGQQ8WZA9 623 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 CD101Q93033 1021 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 MAGOHBQ96A72 148 aaKnown RBP2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 PGM2Q96G03 612 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 SGK494Q96LW2 274 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 INTS14Q96SY0 518 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 TSG101Q99816 390 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 SH3GL3Q99963 347 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 GPATCH1Q9BRR8 931 aaKnown RBP2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 TMEM109Q9BVC6 243 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 GTPBP2Q9BX10 602 aaKnown RBP2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 FN3KQ9H479 309 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 CDH20Q9HBT6 801 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 XAB2Q9HCS7 855 aaKnown RBP2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 TCF7L2Q9NQB0 619 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 ZDHHC18Q9NUE0 388 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 MTUS1Q9ULD2 1270 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 SNX7Q9UNH6 387 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 KCNK7Q9Y2U2 307 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 ZFP37Q9Y6Q3 630 aaPredicted RBP2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 COL5A3P25940 1745 aaPredicted RBP2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 SNED1Q8TER0 1413 aa2.93□□□□□ -1.94
CALCOCO2-216ENST00000509784 CDK5RAP2Q96SN8 1893 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 A0A087WV48 116 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 A0A087X0T9 212 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 A0A1W2PS18 150 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 DENND3A2RUS2 1198 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 ENO4A6NNW6 628 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 H0YAE9 185 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 O00370 1275 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 TTI1O43156 1089 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 SLC7A4O43246 635 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 ANP32DO95626 131 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 GNA14O95837 355 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 AGTP01019 485 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 IGHV4-39P01824 125 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 CSN3P07498 182 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 SNRNP70P08621 437 aaKnown RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 VIMP08670 466 aaKnown RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 FAM228BP0C875 321 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 SAGP10523 405 aaPredicted RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 HAPLN1P10915 354 aaPredicted RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 FGF3P11487 239 aaPredicted RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 CETPP11597 493 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 CCNB1P14635 433 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 TCF4P15884 667 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 FERP16591 822 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 MSH3P20585 1137 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 SP100P23497 879 aaPredicted RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 DGKAP23743 735 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 ACAT1P24752 427 aaKnown RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 PSMA3P25788 255 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 KIF5BP33176 963 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 PTGER4P35408 488 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 MNDAP41218 407 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 HOXA1P49639 335 aaPredicted RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 PDX1P52945 283 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 CDH11P55287 796 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 PTENP60484 403 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 KCNJ2P63252 427 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 PITX1P78337 314 aaPredicted RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 SARNPP82979 210 aaKnown RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 KLRC3Q07444 240 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 ZNF415Q09FC8 603 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 GAGE5Q13069 117 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 GAGE6Q13070 117 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 CUL3Q13618 768 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 ITGA7Q13683 1181 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 RBBP5Q15291 538 aaKnown RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 CA9Q16790 459 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 SBK1Q52WX2 424 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 ODF2Q5BJF6 829 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 TNFAIP8L3Q5GJ75 292 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 NHSL2Q5HYW2 709 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 SHEQ5VZ18 495 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 DUPD1Q68J44 220 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 C11orf63Q6NUN7 778 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 LINGO4Q6UY18 593 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 ANO5Q75V66 913 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 ASRGL1Q7L266 308 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 TRPM8Q7Z2W7 1104 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 EXOC3L1Q86VI1 746 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 MYOCDQ8IZQ8 938 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 KIRREL3Q8IZU9 778 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 SYCE1Q8N0S2 351 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 DNAJC22Q8N4W6 341 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 METTL13Q8N6R0 699 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 GBP7Q8N8V2 638 aaPredicted RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 THAP8Q8NA92 274 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 DMBX1Q8NFW5 382 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 VANGL1Q8TAA9 524 aaPredicted RBP2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 OLIG1Q8TAK6 271 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 GDAP1Q8TB36 358 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 SDR42E1Q8WUS8 393 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 TCP11Q8WWU5 503 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 NSMAFQ92636 917 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 RAD54LQ92698 747 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 MR1Q95460 341 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 HES6Q96HZ4 224 aa2.92□□□□□ -1.94
CALCOCO2-216ENST00000509784 MARK4Q96L34 752 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms