RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 IL11RAQ14626 422 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 STXBP2Q15833 593 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PDK4Q16654 411 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 LRRC36Q1X8D7 754 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 GOLGA7BQ2TAP0 167 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 EDRF1Q3B7T1 1238 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ACCSLQ4AC99 568 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM35AQ53FP2 167 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 TOR2AQ5JU69 321 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CELF3Q5SZQ8 465 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CCNYL2Q5T2Q4 361 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 RNLSQ5VYX0 342 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 OR52E8Q6IFG1 317 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 OR6B2Q6IFH4 312 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 NCEH1Q6PIU2 408 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 FAM151BQ6UXP7 276 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 NPSR1Q6W5P4 371 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 KCTD8Q6ZWB6 473 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 P4HA3Q7Z4N8 544 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 DPPA2Q7Z7J5 298 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 SETD3Q86TU7 594 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 RTN4RL2Q86UN3 420 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF410Q86VK4 478 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 HORMAD1Q86X24 394 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ECHDC2Q86YB7 292 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 HPS6Q86YV9 775 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PLD3Q8IV08 490 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ZDHHC21Q8IVQ6 265 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CCDC117Q8IWD4 279 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 IFT20Q8IY31 132 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 UBE2J2Q8N2K1 259 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ZGPATQ8N5A5 531 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 FAM89BQ8N5H3 189 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ZBTB2Q8N680 514 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 METTL25Q8N6Q8 603 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CNBD1Q8NA66 436 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 DBF4BQ8NFT6 615 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 OR7G3Q8NG95 312 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 OR10T2Q8NGX3 314 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ACTL9Q8TC94 416 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PNPT1Q8TCS8 783 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 GPX8Q8TED1 209 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 MAFIPQ8WZ33 124 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 NKD2Q969F2 451 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 MCUR1Q96AQ8 359 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 SLC7A6OSQ96CW6 309 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 TMCO6Q96DC7 493 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 OMA1Q96E52 524 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 LINGO1Q96FE5 620 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 OXNAD1Q96HP4 312 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 DYDC2Q96IM9 177 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PBKQ96KB5 322 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 RPL10LQ96L21 214 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF570Q96NI8 536 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 NEURL2Q9BR09 285 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 DGCR6LQ9BY27 220 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 OSBPL8Q9BZF1 889 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 GAL3ST2Q9H3Q3 398 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ARMT1Q9H993 441 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 COG4Q9H9E3 785 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 FN3KRPQ9HA64 309 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CSNK1G1Q9HCP0 422 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 G6PC2Q9NQR9 355 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 XPNPEP1Q9NQW7 623 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 POT1Q9NUX5 634 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF701Q9NV72 531 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CHRNA9Q9UGM1 479 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 BCAP29Q9UHQ4 241 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PADI1Q9ULC6 663 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 SCML1Q9UN30 329 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 SHOC2Q9UQ13 582 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 NIP7Q9Y221 180 aaKnown RBP eCLIP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ARL2BPQ9Y2Y0 163 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PTRH2Q9Y3E5 179 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 RHBDD3Q9Y3P4 386 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 HYOU1Q9Y4L1 999 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PCDHA9Q9Y5H5 950 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 LIPGQ9Y5X9 500 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 RAD54BQ9Y620 910 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ZHX2Q9Y6X8 837 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 N4BP2Q86UW6 1770 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 KNDC1Q76NI1 1749 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PREX1Q8TCU6 1659 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 DLC1Q96QB1 1528 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 LMTK3Q96Q04 1460 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ASTN2O75129 1339 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ESYT2A0FGR8 921 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ARHGEF35A5YM69 484 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ERI2A8K979 691 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 BECN2A8MW95 431 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 MYO1GB0I1T2 1018 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TXNDC9O14530 226 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 HS3ST1O14792 307 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 ACOX3O15254 700 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 TNFSF14O43557 240 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 DCXO43602 365 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 KDELR3O43731 214 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SHOX2O60902 331 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 NDUFS3O75489 264 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 BCAR3O75815 825 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms