RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 TRAM2Q15035 370 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 ZNF691Q5VV52 312 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 MS4A15Q8N5U1 240 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TMEM102Q8N9M5 508 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 EMID1Q96A84 441 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SLC30A3Q99726 388 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 DPYSL5Q9BPU6 564 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 PRMT8Q9NR22 394 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 OLAHQ9NV23 265 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 GPR83Q9NYM4 423 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 KIAA1522Q9P206 1035 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 DPP7Q9UHL4 492 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 ARL5AQ9Y689 179 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 A0A0G2JMP0 313 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SMIM28A0A1B0GU29 152 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 LOC285095A0A1B0GVY8 99 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 HAS3O00219 553 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CDC7O00311 574 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 PI15O43692 258 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SEC14L2O76054 403 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 VNN2O95498 520 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 ADAP00813 363 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 ACADMP11310 421 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CD1DP15813 335 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 PITPNBP48739 271 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 RGS6P49758 472 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TPMTP51580 245 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 INHBCP55103 352 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TUBB3Q13509 450 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 RCAN2Q14206 197 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 MAD2L1BPQ15013 274 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SF3B4Q15427 424 aaKnown RBP eCLIP7.07□□□□□ -1.287e-7■■■■■ 28.1
UBE2D3-224ENST00000508474 CRY2Q49AN0 593 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 KRBOX4Q5JUW0 171 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 DACT2Q5SW24 774 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TMEM69Q5SWH9 247 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CATSPERGQ6ZRH7 1159 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 RNF180Q86T96 592 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 TMEM151AQ8N4L1 468 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 KDM1BQ8NB78 822 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 ACBD4Q8NC06 268 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 OR4M2Q8NGB6 313 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 ZNF563Q8TA94 476 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CCDC86Q9H6F5 360 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 SDR39U1Q9NRG7 319 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 HEBP1Q9NRV9 189 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 CNOT2Q9NZN8 540 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 HES2Q9Y543 173 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 PCDHB11Q9Y5F2 797 aa7.07□□□□□ -1.28
UBE2D3-224ENST00000508474 A0A1W2PQ09 198 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 ATP6V1G2-DDX39BF2Z307 99 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 SEPT4O43236 478 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 DNAJB6O75190 326 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 B3GALNT1O75752 331 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 SOX14O95416 240 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 IFNA2P01563 188 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 BCHEP06276 602 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 CDK1P06493 297 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 CAPN3P20807 821 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 EFNA1P20827 205 aaPredicted RBP7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 FUT4P22083 530 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 DPP6P42658 865 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 CRYBB1P53674 252 aaPredicted RBP7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 CLVS2Q5SYC1 327 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 ENPP6Q6UWR7 440 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 IDO2Q6ZQW0 420 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 NXPE1Q8N323 547 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 POGLUT1Q8NBL1 392 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 NDRG1Q92597 394 aaKnown RBP7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 TMEM125Q96AQ2 219 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 PYCR2Q96C36 320 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 SYT4Q9H2B2 425 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 RANGRFQ9HD47 186 aaPredicted RBP7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 GIMAP2Q9UG22 337 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 SLC27A5Q9Y2P5 690 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 CCL15-CCL14A0A0B4J2E2 113 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 SMCO3A2RU48 225 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 SMIM30A4D0T7 59 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 C7orf72A4D263 438 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 CXCL11O14625 94 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 NIPSNAP2O75323 286 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 FARS2O95363 451 aaKnown RBP7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 WDPCPO95876 746 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 IL1AP01583 271 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 ASGR1P07306 291 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 PRKXP51817 358 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 ATXN1P54253 815 aaKnown RBP7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 OR12D2P58182 307 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 MRPS10P82664 201 aaKnown RBP7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 POU4F2Q12837 409 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 FAPQ12884 760 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 GRIN2CQ14957 1233 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 TAF1CQ15572 869 aaPredicted RBP7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 CCL15Q16663 113 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 TATDN3Q17R31 274 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 SOWAHAQ2M3V2 549 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 USP41Q3LFD5 358 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 SIRPB2Q5JXA9 342 aa7.06□□□□□ -1.28
UBE2D3-224ENST00000508474 RPL13AP3Q6NVV1 102 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms