RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PCSK2P16519 638 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 TCN2P20062 427 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 HIST1H1TP22492 207 aaPredicted RBP19.03■□□□□ 0.64
USP53-203ENST00000507597 TLX1P31314 330 aaPredicted RBP19.03■□□□□ 0.64
USP53-203ENST00000507597 GSTM5P46439 218 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 OR1D4P47884 311 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 TCHHL1Q5QJ38 904 aaPredicted RBP19.03■□□□□ 0.64
USP53-203ENST00000507597 MLIPQ5VWP3 458 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 ADNP2Q6IQ32 1131 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 OVCH1Q7RTY7 1134 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 DTX1Q86Y01 620 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 METTL4Q8N3J2 472 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 ZCCHC7Q8N3Z6 543 aaKnown RBP19.03■□□□□ 0.64
USP53-203ENST00000507597 SLC38A9Q8NBW4 561 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 SNIP1Q8TAD8 396 aaKnown RBP19.03■□□□□ 0.64
USP53-203ENST00000507597 KCNE4Q8WWG9 221 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 GATA6Q92908 595 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 C14orf105Q9NVL8 296 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 LYARQ9NX58 379 aaKnown RBP19.03■□□□□ 0.64
USP53-203ENST00000507597 PHF11Q9UIL8 331 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 TMED5Q9Y3A6 229 aa19.03■□□□□ 0.64
USP53-203ENST00000507597 MDC1Q14676 2089 aaKnown RBP19.03■□□□□ 0.64
USP53-203ENST00000507597 BLACEA4D250 179 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 SYNDIG1LA6NDD5 238 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 NPIPB8E9PQR5 432 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 SGK494L7N484 410 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 PLPP1O14494 284 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 SH3BGRLO75368 114 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 RNH1P13489 461 aaKnown RBP19.02■□□□□ 0.64
USP53-203ENST00000507597 JAK1P23458 1154 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 PRPH2P23942 346 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 MAPK1P28482 360 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 STAT5AP42229 794 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 HTR6P50406 440 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 MAD2L1Q13257 205 aaPredicted RBP19.02■□□□□ 0.64
USP53-203ENST00000507597 NR6A1Q15406 480 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 UGT3A2Q3SY77 523 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 ZNF385CQ66K41 422 aaPredicted RBP19.02■□□□□ 0.64
USP53-203ENST00000507597 SCIMPQ6UWF3 145 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 ZNF517Q6ZMY9 492 aaPredicted RBP19.02■□□□□ 0.64
USP53-203ENST00000507597 LRRC69Q6ZNQ3 347 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 TIPARPQ7Z3E1 657 aaKnown RBP19.02■□□□□ 0.64
USP53-203ENST00000507597 RNF175Q8N4F7 328 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 NKD1Q969G9 470 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 C19orf60Q96EN9 201 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 VPS50Q96JG6 964 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 OR1F2PQ96R84 312 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 ACPTQ9BZG2 426 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 C20orf27Q9GZN8 174 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 CHST8Q9H2A9 424 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 DDX31Q9H8H2 851 aaKnown RBP19.02■□□□□ 0.64
USP53-203ENST00000507597 WDR54Q9H977 334 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 WDR41Q9HAD4 459 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 LYRM4Q9HD34 91 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 PRDM7Q9NQW5 492 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 WDR70Q9NW82 654 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 C1orf109Q9NX04 203 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 TRPC4Q9UBN4 977 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 FARSAQ9Y285 508 aaKnown RBP19.02■□□□□ 0.64
USP53-203ENST00000507597 MAU2Q9Y6X3 613 aa19.02■□□□□ 0.64
USP53-203ENST00000507597 SAP18O00422 153 aaKnown RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 PIP5K1BO14986 540 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 SEC22BO75396 215 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 SCELO95171 688 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 TGDSO95455 350 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 TBX6O95947 436 aaPredicted RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 LINC00032P0C843 101 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 ATP5A1P25705 553 aaKnown RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 ARRB2P32121 409 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 BUD31P41223 144 aaPredicted RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 TRA2BP62995 288 aaKnown RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 HMGCS1Q01581 520 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 SMU1Q2TAY7 513 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 ATP6AP1LQ52LC2 224 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 CCNYL2Q5T2Q4 361 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 LRRC34Q8IZ02 419 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 METTL27Q8N6F8 245 aaPredicted RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 ACOT4Q8N9L9 421 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 OR51Q1Q8NH59 317 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 CHTF18Q8WVB6 975 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 MIEF2Q96C03 454 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 HBEGFQ99075 208 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 SIKE1Q9BRV8 207 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 MRPL1Q9BYD6 325 aaKnown RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 SLC26A1Q9H2B4 701 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 CCDC134Q9H6E4 229 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 ZNF395Q9H8N7 513 aaPredicted RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 GPN2Q9H9Y4 310 aaPredicted RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 LRTM1Q9HBL6 345 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 TNFRSF12AQ9NP84 129 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 PNPOQ9NVS9 261 aa19.01■□□□□ 0.63
USP53-203ENST00000507597 WBP11Q9Y2W2 641 aaKnown RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 MRPS2Q9Y399 296 aaKnown RBP19.01■□□□□ 0.63
USP53-203ENST00000507597 TMEM233B4DJY2 109 aa19■□□□□ 0.63
USP53-203ENST00000507597 TCP11X1B4DZS4 312 aa19■□□□□ 0.63
USP53-203ENST00000507597 CLDN4O14493 209 aa19■□□□□ 0.63
USP53-203ENST00000507597 PCDH17O14917 1159 aa19■□□□□ 0.63
USP53-203ENST00000507597 RDH16O75452 317 aa19■□□□□ 0.63
USP53-203ENST00000507597 SKAP2O75563 359 aaPredicted RBP19■□□□□ 0.63
USP53-203ENST00000507597 CYC1P08574 325 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms