RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FAM120AOSQ5T036 256 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 MEI1Q5TIA1 1274 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 HECTD2Q5U5R9 776 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 ANKRD34AQ69YU3 496 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 ABHD17CQ6PCB6 329 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 SYDE1Q6ZW31 735 aaPredicted RBP6.62□□□□□ -1.35
VCAN-207ENST00000507162 IRF2BP2Q7Z5L9 587 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 PDSS2Q86YH6 399 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 RFX6Q8HWS3 928 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 HSCBQ8IWL3 235 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 PM20D2Q8IYS1 436 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 DEPDC4Q8N2C3 294 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 NIPA2Q8N8Q9 360 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 MLKLQ8NB16 471 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 KCT2Q8NC54 265 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 APCDD1LQ8NCL9 501 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 NCLNQ969V3 563 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 ANKRD9Q96BM1 317 aaPredicted RBP6.62□□□□□ -1.35
VCAN-207ENST00000507162 TBC1D20Q96BZ9 403 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 INTS12Q96CB8 462 aaKnown RBP6.62□□□□□ -1.35
VCAN-207ENST00000507162 TRIM11Q96F44 468 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 SCYL1Q96KG9 808 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 TNFRSF13CQ96RJ3 184 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 SLC30A3Q99726 388 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 PHACTR1Q9C0D0 580 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 CALHM2Q9HA72 323 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 PRM3Q9NNZ6 103 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 TAC3Q9UHF0 121 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 RSPH14Q9UHP6 348 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 TSR3Q9UJK0 312 aaKnown RBP6.62□□□□□ -1.35
VCAN-207ENST00000507162 RUVBL2Q9Y230 463 aaKnown RBP6.62□□□□□ -1.35
VCAN-207ENST00000507162 PRKDCP78527 4128 aaKnown RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 DOCK7Q96N67 2140 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 FAM234BA2RU67 622 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 MBD3L3A6NE82 208 aaPredicted RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 CD8B2A6NJW9 211 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 POM121CA8CG34 1229 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 A8MXE2 369 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 F8W8V4 182 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 H7BY64 318 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 HS3ST1O14792 307 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 KIAA0513O60268 411 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 NDUFS7O75251 213 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 GPC4O75487 556 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 SMNDC1O75940 238 aaKnown RBP eCLIP6.61□□□□□ -1.35
VCAN-207ENST00000507162 ALX3O95076 343 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ACSL3O95573 720 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ZNF16P17020 682 aaPredicted RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 JAK1P23458 1154 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 DPP4P27487 766 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 KCNJ5P48544 419 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ACTG1P63261 375 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 PRDX1Q06830 199 aaKnown RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 ICE2Q659A1 982 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ZNF425Q6IV72 752 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ZNF704Q6ZNC4 412 aaPredicted RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 ZNF567Q8N184 647 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 KRT222Q8N1A0 295 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ZNF611Q8N823 705 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ANKK1Q8NFD2 765 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 B3GNT7Q8NFL0 401 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 MBD3L2Q8NHZ7 208 aaPredicted RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 HMGCLL1Q8TB92 370 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 TFB1MQ8WVM0 346 aaKnown RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 SMPDL3AQ92484 453 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 GCDHQ92947 438 aaPredicted RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 VMP1Q96GC9 406 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 CDKN2AIPNLQ96HQ2 116 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 SGCZQ96LD1 299 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 HS6ST2Q96MM7 605 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 FOPNLQ96NB1 174 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 PRAP1Q96NZ9 151 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ALS2CR12Q96Q35 445 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 RASL10BQ96S79 203 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 SYT11Q9BT88 431 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 AARSD1Q9BTE6 412 aaKnown RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 SFXN3Q9BWM7 321 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 RHBGQ9H310 441 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 PIGMQ9H3S5 423 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 HAUS4Q9H6D7 363 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ACKR4Q9NPB9 350 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 NECTIN3Q9NQS3 549 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 SAE1Q9UBE0 346 aaPredicted RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 MYOTQ9UBF9 498 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ZNF223Q9UK11 482 aaPredicted RBP6.61□□□□□ -1.35
VCAN-207ENST00000507162 KCNS2Q9ULS6 477 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 SLC6A5Q9Y345 797 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 ATG4BQ9Y4P1 393 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 PCDHA13Q9Y5I0 950 aa6.61□□□□□ -1.35
VCAN-207ENST00000507162 IGHV4-30-2A0A087WSY4 118 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 OR51F1A6NGY5 319 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 SSX4O60224 188 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 ANXA9O76027 345 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 STK10O94804 968 aaKnown RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 CCNDBP1O95273 360 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 B3GALT4O96024 378 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 IGHV4-39P01824 125 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 ZFXP17010 805 aaPredicted RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 HNF1AP20823 631 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 IGFBP5P24593 272 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms