RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 GAL3ST3Q96A11 431 aa11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 RHBDF1Q96CC6 855 aa11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 TSPAN17Q96FV3 270 aa11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 C16orf45Q96MC5 204 aaPredicted RBP11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 PITHD1Q9GZP4 211 aaPredicted RBP11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 DERL2Q9GZP9 239 aa11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 NT5DC2Q9H857 520 aa11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 TRIM45Q9H8W5 580 aaPredicted RBP11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 NECTIN3Q9NQS3 549 aa11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 GPRC5BQ9NZH0 403 aa11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 TXNDC16Q9P2K2 825 aa11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 SNX24Q9Y343 169 aa11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 NOTCH2Q04721 2471 aa11.29□□□□□ -0.6
PDLIM7-214ENST00000505746 LRIT2A6NDA9 550 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 SYNDIG1LA6NDD5 238 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 ANKDD1BA6NHY2 528 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 A8MUA0 341 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 CLDN4O14493 209 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 TP73O15350 636 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 NME2P1O60361 137 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 WISP2O76076 250 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 ZNF24P17028 368 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 NME2P22392 152 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 HTR1EP28566 365 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 GDF5P43026 501 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 SLC6A12P48065 614 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 CLCN2P51788 898 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 HSD17B7P56937 341 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 SLBPQ14493 270 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 FASTKD3Q14CZ7 662 aaKnown RBP11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 TERF2Q15554 542 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 TGFBIQ15582 683 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 ZNF630Q2M218 657 aaPredicted RBP11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 ZNF468Q5VIY5 522 aaPredicted RBP11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 MCEMP1Q8IX19 187 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 ARMC10Q8N2F6 343 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 GHDCQ8N2G8 530 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 POGLUT1Q8NBL1 392 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 B3GNT7Q8NFL0 401 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 ADAMTS18Q8TE60 1221 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 PYROXD1Q8WU10 500 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 CCT6BQ92526 530 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 MS4A6EQ96DS6 147 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 KRT12Q99456 494 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 MCMBPQ9BTE3 642 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 UNKQ9C0B0 810 aaKnown RBP11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 TSPAN10Q9H1Z9 355 aaPredicted RBP11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 EHD1Q9H4M9 534 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 CNOT10Q9H9A5 744 aaKnown RBP11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 TINAGQ9UJW2 476 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 MRPS33Q9Y291 106 aaKnown RBP11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 KLF13Q9Y2Y9 288 aaPredicted RBP11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 HEATR5BQ9P2D3 2071 aa11.28□□□□□ -0.6
PDLIM7-214ENST00000505746 NCF1BA6NI72 391 aaPredicted RBP11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 NCF1CA8MVU1 366 aaPredicted RBP11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 KLRC4-KLRK1H3BQV0 150 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 CLGNO14967 610 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 FANCGO15287 622 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 ERI3O43414 337 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 B3GALT2O43825 422 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 CLEC3AO75596 197 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 MYO1DO94832 1006 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 PRF1P14222 555 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 NCF1P14598 390 aaPredicted RBP11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 ABOP16442 354 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 STMN1P16949 149 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 GRNP28799 593 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 PTGER4P35408 488 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 GGT5P36269 586 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 RPL21P46778 160 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 RAB38P57729 211 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 ATP6V0D1P61421 351 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 TGM3Q08188 693 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 CALCOCO2Q13137 446 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 SLC13A2Q13183 592 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 RUNX2Q13950 521 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 RCN2Q14257 317 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 C18orf21Q32NC0 220 aaPredicted RBP11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 CDKL4Q5MAI5 379 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 TRIM40Q6P9F5 258 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 CAPN12Q6ZSI9 719 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 GPSM1Q86YR5 675 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 SIAH3Q8IW03 269 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 ZNF595Q8IYB9 648 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 EID3Q8N140 333 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 APCDD1LQ8NCL9 501 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 OR2L5Q8NG80 312 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 REXO4Q9GZR2 422 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 PRTFDC1Q9NRG1 225 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 PNO1Q9NRX1 252 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 DNAJC11Q9NVH1 559 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 WWOXQ9NZC7 414 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 MTO1Q9Y2Z2 717 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 MEMO1Q9Y316 297 aa11.27□□□□□ -0.61
PDLIM7-214ENST00000505746 CROCCQ5TZA2 2017 aa11.26□□□□□ -0.61
PDLIM7-214ENST00000505746 MDC1Q14676 2089 aaKnown RBP11.26□□□□□ -0.61
PDLIM7-214ENST00000505746 TRBV11-1A0A0K0K1C0 115 aa11.26□□□□□ -0.61
PDLIM7-214ENST00000505746 FAM187AA6NFU0 413 aa11.26□□□□□ -0.61
PDLIM7-214ENST00000505746 C4orf51C9J302 202 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms