RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SCMH1Q96GD3 660 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 UBXN10Q96LJ8 280 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 RHBGQ9H310 441 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 CLK4Q9HAZ1 481 aaKnown RBP13.38□□□□□ -0.27
VTI1A-209ENST00000496445 PRDM9Q9NQV7 894 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 GPRC5BQ9NZH0 403 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 TXNDC16Q9P2K2 825 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 CLDN16Q9Y5I7 305 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 LRIT2A6NDA9 550 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 GABRR3A8MPY1 467 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 ERI3O43414 337 aaKnown RBP13.37□□□□□ -0.27
VTI1A-209ENST00000496445 ZG16O60844 167 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 NEURL1O76050 574 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 CRYABP02511 175 aaKnown RBP13.37□□□□□ -0.27
VTI1A-209ENST00000496445 GSTA2P09210 222 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 DCTP40126 519 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 KCNC1P48547 511 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 HNRNPFP52597 415 aaKnown RBP13.37□□□□□ -0.27
VTI1A-209ENST00000496445 RAB10P61026 200 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 ATP6V0D1P61421 351 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 STXBP1P61764 594 aaKnown RBP13.37□□□□□ -0.27
VTI1A-209ENST00000496445 ETF1P62495 437 aaKnown RBP13.37□□□□□ -0.27
VTI1A-209ENST00000496445 BTN3A2P78410 334 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 RUNX2Q13950 521 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 ADPRMQ3LIE5 342 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 CDKL4Q5MAI5 379 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 SPINK14Q6IE38 97 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 GFRALQ6UXV0 394 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 SYT10Q6XYQ8 523 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 FJX1Q86VR8 437 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 CCDC25Q86WR0 208 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 GPSM1Q86YR5 675 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 SCUBE1Q8IWY4 988 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 CTAGE3PQ8IX95 158 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 LGI4Q8N135 537 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 SLC5A8Q8N695 610 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 TTLQ8NG68 377 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 DNAJB8Q8NHS0 232 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 WDR34Q96EX3 536 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 QRFPRQ96P65 431 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 UTP23Q9BRU9 249 aaKnown RBP13.37□□□□□ -0.27
VTI1A-209ENST00000496445 EHD1Q9H4M9 534 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 NT5DC2Q9H857 520 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 DNAJC11Q9NVH1 559 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 PTBP2Q9UKA9 531 aaKnown RBP13.37□□□□□ -0.27
VTI1A-209ENST00000496445 UTP11Q9Y3A2 253 aaKnown RBP13.37□□□□□ -0.27
VTI1A-209ENST00000496445 PCDHGB6Q9Y5F9 930 aa13.37□□□□□ -0.27
VTI1A-209ENST00000496445 ASPDHA6ND91 283 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 PSMD12O00232 456 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-209ENST00000496445 CLEC3AO75596 197 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 STK16O75716 305 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 UNC5CO95185 931 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 SLC35E2BP0CK96 405 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 GSTM2P28161 218 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 TPP2P29144 1249 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-209ENST00000496445 SPRP35270 261 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-209ENST00000496445 MAGEA4P43358 317 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 GUCY2DQ02846 1103 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 CAV1Q03135 178 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 SLMAPQ14BN4 828 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 ZRSR2Q15696 482 aaKnown RBP13.36□□□□□ -0.27
VTI1A-209ENST00000496445 GRTP1Q5TC63 336 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 SULT1C3Q6IMI6 304 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 CYP4X1Q8N118 509 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 KRT78Q8N1N4 520 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 PPM1NQ8N819 430 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 SNX31Q8N9S9 440 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 FBF1Q8TES7 1133 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 CCT6BQ92526 530 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 EXT2Q93063 718 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 RELTQ969Z4 430 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 KIAA1191Q96A73 305 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 SEC16BQ96JE7 1060 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 CSF3RQ99062 836 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 PITHD1Q9GZP4 211 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-209ENST00000496445 RAB17Q9H0T7 212 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 CDCP1Q9H5V8 836 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 ALG9Q9H6U8 611 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 CNOT10Q9H9A5 744 aaKnown RBP13.36□□□□□ -0.27
VTI1A-209ENST00000496445 KLHL1Q9NR64 748 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 METRNQ9UJH8 293 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 ZNF490Q9ULM2 529 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-209ENST00000496445 RNF112Q9ULX5 631 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 MMACHCQ9Y4U1 282 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 AKAP9Q99996 3911 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 MYO7BQ6PIF6 2116 aa13.36□□□□□ -0.27
VTI1A-209ENST00000496445 CACNA1DQ01668 2161 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 A0A1B0GUH1 482 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 ESYT3A0FGR9 886 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 A8MUA0 341 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 CLGNO14967 610 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 H2AFYO75367 372 aaKnown RBP13.35□□□□□ -0.27
VTI1A-209ENST00000496445 CERS1P27544 350 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 PPP2R1BP30154 601 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 PLA2G16P53816 162 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 PER3P56645 1201 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 RAB38P57729 211 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 TAS2R50P59544 299 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 DOC2AQ14183 400 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 E2F2Q14209 437 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms