RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 IFT88Q13099 833 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 RUNX2Q13950 521 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 SSPNQ14714 243 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 DEPDC1Q5TB30 811 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 KHDRBS2Q5VWX1 349 aaKnown RBP18.37■□□□□ 0.53
HDAC4-212ENST00000495497 CHSY3Q70JA7 882 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 CA13Q8N1Q1 262 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 TLCD1Q96CP7 247 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 HBEGFQ99075 208 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 ELOVL6Q9H5J4 265 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 MLXIPLQ9NP71 852 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 TNFRSF12AQ9NP84 129 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 PRDM7Q9NQW5 492 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 TIMM22Q9Y584 194 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 MANBAO00462 879 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 BMP10O95393 424 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 RECKO95980 971 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 CERS1P27544 350 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 PKNOX1P55347 436 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 PHEXP78562 749 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 TBR1Q16650 682 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 CRTC2Q53ET0 693 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-212ENST00000495497 FAAH2Q6GMR7 532 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 ZNF793Q6ZN11 406 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 ANKRD42Q8N9B4 389 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 METTL6Q8TCB7 284 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 SELENOMQ8WWX9 145 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 EXTL1Q92935 676 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 MAGEB10Q96LZ2 347 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-212ENST00000495497 CRB3Q9BUF7 120 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 TGIF2Q9GZN2 237 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 STMN4Q9H169 189 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-212ENST00000495497 C3orf18Q9UK00 162 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 NXT1Q9UKK6 140 aaKnown RBP18.36■□□□□ 0.53
HDAC4-212ENST00000495497 PTPRQQ9UMZ3 2332 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 LHX6Q9UPM6 363 aa18.36■□□□□ 0.53
HDAC4-212ENST00000495497 UQCRHLA0A096LP55 91 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 FAM227AF5H4B4 570 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 MASP2O00187 686 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 FOXE1O00358 373 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-212ENST00000495497 PLPP1O14494 284 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 CDC123O75794 336 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-212ENST00000495497 SASH3O75995 380 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 ESRRBO95718 433 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 HEXBP07686 556 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 UQCRHP07919 91 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 PTX3P26022 381 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-212ENST00000495497 HMOX2P30519 316 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 HPDP32754 393 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-212ENST00000495497 SERPINB4P48594 390 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 HTR6P50406 440 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 RAP1GDS1P52306 607 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 ATP1A4Q13733 1029 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 TMEM35AQ53FP2 167 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 MFSD4BQ5TF39 518 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 SCIMPQ6UWF3 145 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 PPP1R32Q7Z5V6 425 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 RGMAQ96B86 450 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 KCNC2Q96PR1 638 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 COPS7BQ9H9Q2 264 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-212ENST00000495497 C14orf105Q9NVL8 296 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 MKL2Q9ULH7 1088 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 SNX6Q9UNH7 406 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 POLHQ9Y253 713 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 STK38LQ9Y2H1 464 aa18.35■□□□□ 0.53
HDAC4-212ENST00000495497 CCDC88CQ9P219 2028 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 LOC400499M0QZD8 3231 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 ARGFXA6NJG6 315 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 IDSB3KWA1 339 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 TM9SF1O15321 606 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 B3GALT2O43825 422 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 ATP5A1P25705 553 aaKnown RBP18.34■□□□□ 0.53
HDAC4-212ENST00000495497 SERPINB3P29508 390 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 SSR2P43308 183 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 EMP2P54851 167 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 MTTPP55157 894 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 NAA20P61599 178 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 SKP1P63208 163 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 TGM3Q08188 693 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 ASPHQ12797 758 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 CHAF1BQ13112 559 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 AP5B1Q2VPB7 878 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 MINDY4Q4G0A6 757 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 TTMPQ5BVD1 217 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 AGBL2Q5U5Z8 902 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 CES4AQ5XG92 561 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 OR4C11Q6IEV9 310 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 NIPAL1Q6NVV3 410 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 ATG14Q6ZNE5 492 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 RAB43Q86YS6 212 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 NUDCD3Q8IVD9 361 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 CNDP1Q96KN2 507 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 SERINC2Q96SA4 455 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 PAIP2Q9BPZ3 127 aaKnown RBP18.34■□□□□ 0.53
HDAC4-212ENST00000495497 TBCDQ9BTW9 1192 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 SLC29A3Q9BZD2 475 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 VN1R1Q9GZP7 353 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 LANCL2Q9NS86 450 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 MAN2B2Q9Y2E5 1009 aa18.34■□□□□ 0.53
HDAC4-212ENST00000495497 PCSK5Q92824 1860 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms