RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 HIST2H2ACQ16777 129 aaPredicted RBP31.21■■■□□ 2.59
CBX4-203ENST00000494546 PAGE2BQ5JRK9 111 aa31.21■■■□□ 2.59
CBX4-203ENST00000494546 HIST2H2AA3Q6FI13 130 aa31.21■■■□□ 2.59
CBX4-203ENST00000494546 QSOX2Q6ZRP7 698 aa31.21■■■□□ 2.59
CBX4-203ENST00000494546 CYP4X1Q8N118 509 aa31.21■■■□□ 2.59
CBX4-203ENST00000494546 REXO4Q9GZR2 422 aaKnown RBP31.21■■■□□ 2.59
CBX4-203ENST00000494546 OPTCQ9UBM4 332 aa31.21■■■□□ 2.59
CBX4-203ENST00000494546 FLNCQ14315 2725 aa31.21■■■□□ 2.59
CBX4-203ENST00000494546 ALDOAP04075 364 aaKnown RBP31.2■■■□□ 2.59
CBX4-203ENST00000494546 MAOAP21397 527 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 TNFSF10P50591 281 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 PLA2G16P53816 162 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 FCRLBQ6BAA4 426 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 RHEBL1Q8TAI7 183 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 PRR7Q8TB68 274 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 M1APQ8TC57 530 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 GRHL3Q8TE85 626 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 UBTD2Q8WUN7 234 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 FUT8Q9BYC5 575 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 VPS11Q9H270 941 aa31.2■■■□□ 2.59
CBX4-203ENST00000494546 CNTRLQ7Z7A1 2325 aa31.2■■■□□ 2.58
CBX4-203ENST00000494546 TRAV17A0A0B4J275 112 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 K7EPI3 171 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 AGFG2O95081 481 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 CBX6O95503 412 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 TBX6O95947 436 aaPredicted RBP31.19■■■□□ 2.58
CBX4-203ENST00000494546 INHBAP08476 426 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 HPDP32754 393 aaPredicted RBP31.19■■■□□ 2.58
CBX4-203ENST00000494546 RUNX2Q13950 521 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 TBCCQ15814 346 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 TRIM40Q6P9F5 258 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 OR2L5Q8NG80 312 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 SLC44A1Q8WWI5 657 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 TRIM44Q96DX7 344 aaPredicted RBP31.19■■■□□ 2.58
CBX4-203ENST00000494546 BARD1Q99728 777 aaKnown RBP31.19■■■□□ 2.58
CBX4-203ENST00000494546 MMP25Q9NPA2 562 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 PRDM9Q9NQV7 894 aa31.19■■■□□ 2.58
CBX4-203ENST00000494546 A0A088AWK7 358 aa31.18■■■□□ 2.58
CBX4-203ENST00000494546 KLHL2O95198 593 aa31.18■■■□□ 2.58
CBX4-203ENST00000494546 MTHFD2P13995 350 aa31.18■■■□□ 2.58
CBX4-203ENST00000494546 ZNF10P21506 573 aaPredicted RBP31.18■■■□□ 2.58
CBX4-203ENST00000494546 ACAP2Q15057 778 aa31.18■■■□□ 2.58
CBX4-203ENST00000494546 KLC3Q6P597 504 aa31.18■■■□□ 2.58
CBX4-203ENST00000494546 UHMK1Q8TAS1 419 aaKnown RBP31.18■■■□□ 2.58
CBX4-203ENST00000494546 IKBKGQ9Y6K9 419 aa31.18■■■□□ 2.58
CBX4-203ENST00000494546 SCN2AQ99250 2005 aa31.18■■■□□ 2.58
CBX4-203ENST00000494546 ANKUB1A6NFN9 424 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 B3GALT2O43825 422 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 GFAPP14136 432 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 MSH2P43246 934 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 SLC26A5P58743 744 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 ELOAQ14241 798 aaKnown RBP31.17■■■□□ 2.58
CBX4-203ENST00000494546 PFKFB4Q16877 469 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 ADPRMQ3LIE5 342 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 FAM180AQ6UWF9 173 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 CEP112Q8N8E3 955 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 ZNF354BQ96LW1 612 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 PAFAH2Q99487 392 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 NPLQ9BXD5 320 aaPredicted RBP31.17■■■□□ 2.58
CBX4-203ENST00000494546 RNF32Q9H0A6 362 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 NECTIN3Q9NQS3 549 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 ANGPTL3Q9Y5C1 460 aa31.17■■■□□ 2.58
CBX4-203ENST00000494546 SETXQ7Z333 2677 aaKnown RBP31.17■■■□□ 2.58
CBX4-203ENST00000494546 RP1L1Q8IWN7 2480 aaPredicted RBP31.17■■■□□ 2.58
CBX4-203ENST00000494546 PCNAP12004 261 aa31.16■■■□□ 2.58
CBX4-203ENST00000494546 EPB42P16452 691 aa31.16■■■□□ 2.58
CBX4-203ENST00000494546 CASP2P42575 452 aa31.16■■■□□ 2.58
CBX4-203ENST00000494546 ACER2Q5QJU3 275 aa31.16■■■□□ 2.58
CBX4-203ENST00000494546 H3F3CQ6NXT2 135 aa31.16■■■□□ 2.58
CBX4-203ENST00000494546 RPUSD3Q6P087 351 aaKnown RBP31.16■■■□□ 2.58
CBX4-203ENST00000494546 TEX9Q8N6V9 391 aa31.16■■■□□ 2.58
CBX4-203ENST00000494546 ARMC2Q8NEN0 867 aa31.16■■■□□ 2.58
CBX4-203ENST00000494546 QRFPRQ96P65 431 aa31.16■■■□□ 2.58
CBX4-203ENST00000494546 F2RL3Q96RI0 385 aa31.16■■■□□ 2.58
CBX4-203ENST00000494546 COPS7BQ9H9Q2 264 aaPredicted RBP31.16■■■□□ 2.58
CBX4-203ENST00000494546 ESPL1Q14674 2120 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 CPAMD8Q8IZJ3 1885 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 CCDC189A1A4V9 331 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 OR5H15A6NDH6 313 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 POC1B-GALNT4F8VUJ3 575 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 TGM3Q08188 693 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 SETDB1Q15047 1291 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 MED27Q6P2C8 311 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 ABHD17CQ6PCB6 329 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 BEST3Q8N1M1 668 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 FAR1Q8WVX9 515 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 UBE2E3Q969T4 207 aa31.15■■■□□ 2.58
CBX4-203ENST00000494546 CPSF2Q9P2I0 782 aaKnown RBP31.15■■■□□ 2.58
CBX4-203ENST00000494546 PRRC2CQ9Y520 2896 aaKnown RBP31.15■■■□□ 2.58
CBX4-203ENST00000494546 IGKV3D-11A0A0A0MRZ8 115 aa31.14■■■□□ 2.58
CBX4-203ENST00000494546 TCRBV16S1A1N1A0A5B0 115 aa31.14■■■□□ 2.58
CBX4-203ENST00000494546 A8MUA0 341 aa31.14■■■□□ 2.58
CBX4-203ENST00000494546 SEMA7AO75326 666 aa31.14■■■□□ 2.58
CBX4-203ENST00000494546 CERS1P27544 350 aa31.14■■■□□ 2.58
CBX4-203ENST00000494546 MTTPP55157 894 aa31.14■■■□□ 2.58
CBX4-203ENST00000494546 RAB38P57729 211 aa31.14■■■□□ 2.58
CBX4-203ENST00000494546 TAS2R50P59544 299 aa31.14■■■□□ 2.58
CBX4-203ENST00000494546 TAOK1Q7L7X3 1001 aa31.14■■■□□ 2.58
CBX4-203ENST00000494546 CRLF3Q8IUI8 442 aa31.14■■■□□ 2.58
CBX4-203ENST00000494546 PLD6Q8N2A8 252 aaKnown RBP31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms