RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 RNF130Q86XS8 419 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 TOMM5Q8N4H5 51 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 YIPF7Q8N8F6 280 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 ZSCAN4Q8NAM6 433 aaPredicted RBP18.48■□□□□ 0.55
COL27A1-207ENST00000494090 OR4C15Q8NGM1 316 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 NSUN5Q96P11 429 aaKnown RBP18.48■□□□□ 0.55
COL27A1-207ENST00000494090 AIG1Q9NVV5 245 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 SEC14L4Q9UDX3 406 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 KLF15Q9UIH9 416 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 RGPD8O14715 1765 aaPredicted RBP18.48■□□□□ 0.55
COL27A1-207ENST00000494090 IFNA21P01568 189 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ITIH1P19827 911 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 CDKN1CP49918 316 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-207ENST00000494090 CLCN2P51788 898 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 OR12D2P58182 307 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 PYHIN1Q6K0P9 492 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF613Q6PF04 617 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 XKR5Q6UX68 686 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ZFAND4Q86XD8 727 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 FAM86B1Q8N7N1 296 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF366Q8N895 744 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 RTP4Q96DX8 246 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 RBP7Q96R05 134 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 STRADBQ9C0K7 418 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 TEX13CA0A0J9YWL9 993 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 C2orf74A8MZ97 194 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 CDRT1O95170 752 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 CLIC3O95833 236 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 PRH1P02810 166 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 MPC1LP0DKB6 136 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 SUOXP51687 545 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 AKR1D1P51857 326 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 NOXRED1Q6NXP6 359 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ARL9Q6T311 187 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 CHRDL2Q6WN34 429 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 CHERPQ8IWX8 916 aaKnown RBP18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ZDHHC12Q96GR4 267 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 DHRS1Q96LJ7 313 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 SLC30A2Q9BRI3 323 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 NUP188Q5SRE5 1749 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 TSPAN6O43657 245 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 GALTP07902 379 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ATF6P18850 670 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 MATN1P21941 496 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 PDHA2P29803 388 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 CDH11P55287 796 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 RPS21P63220 83 aaKnown RBP18.47■□□□□ 0.55
COL27A1-207ENST00000494090 GSTM4Q03013 218 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 KCNC4Q03721 635 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 TMEM115Q12893 351 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ADAM15Q13444 863 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 OR6N1Q8NGY5 312 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 CEP76Q8TAP6 659 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 PHOSPHO1Q8TCT1 267 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 DLGAP4Q9Y2H0 992 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 LRP6O75581 1613 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ATP6V1G1O75348 118 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 SYN1P17600 705 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 CEACAM7Q14002 265 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 AAK1Q2M2I8 961 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF517Q6ZMY9 492 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ASB18Q6ZVZ8 466 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF550Q7Z398 422 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 OR2M4Q96R27 311 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 L7N2F9 121 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 B4GALT2O60909 372 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 LATS1O95835 1130 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 RPL10P27635 214 aaKnown RBP18.47■□□□□ 0.55
COL27A1-207ENST00000494090 VAMP2P63027 116 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 TRAM1L1Q8N609 369 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 SEC61A2Q9H9S3 476 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 IFT52Q9Y366 437 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 GMEB1Q9Y692 573 aa18.47■□□□□ 0.55
COL27A1-207ENST00000494090 CFAP20Q9Y6A4 193 aaKnown RBP18.47■□□□□ 0.55
COL27A1-207ENST00000494090 SNAP29O95721 258 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 HK1P19367 917 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 ELK4P28324 431 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 RAB8AP61006 207 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 TRAM2Q15035 370 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 SLC36A4Q6YBV0 504 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 TEPSINQ96N21 525 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 P2RY13Q9BPV8 354 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 PELOQ9BRX2 385 aaKnown RBP18.46■□□□□ 0.55
COL27A1-207ENST00000494090 TMED9Q9BVK6 235 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 WDR45Q9Y484 360 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 YES1P07947 543 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 EDNRBP24530 442 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 SOX4Q06945 474 aaPredicted RBP18.46■□□□□ 0.55
COL27A1-207ENST00000494090 TSC22D1Q15714 1073 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 GXYLT1Q4G148 440 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 OSTF1Q92882 214 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 IGKV6-21A0A0C4DH24 114 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 AOC2O75106 756 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 UQCRC2P22695 453 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 KCNAB2Q13303 367 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 BBS10Q8TAM1 723 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 TMEM234Q8WY98 164 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 CMKLR1Q99788 373 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 TSSK6Q9BXA6 273 aa18.46■□□□□ 0.55
COL27A1-207ENST00000494090 CHIAQ9BZP6 476 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms