RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 MAGEB17A8MXT2 336 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 CXCR6O00574 342 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 TXNDC9O14530 226 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 PCDH7O60245 1069 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 DFNA5O60443 496 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 PRAMEF4O60810 478 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 KRT75O95678 551 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 PAK4O96013 591 aaPredicted RBP9.6□□□□□ -0.87
PRPF3-206ENST00000493553 HPRP00739 348 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 IFNA14P01570 189 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 LYNP07948 512 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 ZNF26P17031 533 aaPredicted RBP9.6□□□□□ -0.87
PRPF3-206ENST00000493553 CD22P20273 847 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 OXTRP30559 389 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 AKT2P31751 481 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 ADPRHP54922 357 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 MTPNP58546 118 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 TGM3Q08188 693 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 RBBP4Q09028 425 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 TSTA3Q13630 321 aaPredicted RBP9.6□□□□□ -0.87
PRPF3-206ENST00000493553 PDK3Q15120 406 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 AAK1Q2M2I8 961 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 PYCR3Q53H96 274 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 C2orf27AQ580R0 203 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 SFT2D3Q587I9 215 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 PRAMEF9Q5VWM5 478 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 CPZQ66K79 652 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 TMEM154Q6P9G4 183 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 FAM214BQ7L5A3 538 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 FAM129CQ86XR2 697 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 ADHFE1Q8IWW8 467 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 LILRA2Q8N149 483 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 SYNPOQ8N3V7 929 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 ZNF548Q8NEK5 533 aaPredicted RBP9.6□□□□□ -0.87
PRPF3-206ENST00000493553 LRTOMTQ8WZ04 291 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 NCLNQ969V3 563 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 FAM162AQ96A26 154 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 SLCO4A1Q96BD0 722 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 OR2M4Q96R27 311 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 CPPED1Q9BRF8 314 aaPredicted RBP9.6□□□□□ -0.87
PRPF3-206ENST00000493553 YTHDF1Q9BYJ9 559 aaKnown RBP9.6□□□□□ -0.87
PRPF3-206ENST00000493553 ASPSCR1Q9BZE9 553 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 SERHLQ9NQF3 203 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 VAPAQ9P0L0 249 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 DNAJB9Q9UBS3 223 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 BAG5Q9UL15 447 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 PADI4Q9UM07 663 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 DMTF1Q9Y222 760 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 TDRKHQ9Y2W6 561 aaKnown RBP9.6□□□□□ -0.87
PRPF3-206ENST00000493553 PCDHB14Q9Y5E9 798 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 HS3ST3A1Q9Y663 406 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 AP4B1Q9Y6B7 739 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 U3KQE9 123 aa9.6□□□□□ -0.87
PRPF3-206ENST00000493553 NUMA1Q14980 2115 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 A0A1W2PPC1 479 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 PDZK1P1A8MUH7 402 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 CLIC1O00299 241 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 CLOCKO15516 846 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 CLEC3AO75596 197 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 TIPRLO75663 272 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 RASAL1O95294 804 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 CEACAM5P06731 702 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 FAM58BPP0C7Q3 252 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 GPX2P18283 190 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 SHMT2P34897 504 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 TSFMP43897 325 aaKnown RBP9.59□□□□□ -0.87
PRPF3-206ENST00000493553 CCT8P50990 548 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 CCR5P51681 352 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 ARHGDIAP52565 204 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 ATXN3P54252 364 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-206ENST00000493553 OR4D2P58180 307 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 RPS13P62277 151 aaKnown RBP9.59□□□□□ -0.87
PRPF3-206ENST00000493553 TXNL4AP83876 142 aaKnown RBP9.59□□□□□ -0.87
PRPF3-206ENST00000493553 REEP5Q00765 189 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 PRKCQQ04759 706 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 PRDX1Q06830 199 aaKnown RBP9.59□□□□□ -0.87
PRPF3-206ENST00000493553 SMAD4Q13485 552 aaKnown RBP9.59□□□□□ -0.87
PRPF3-206ENST00000493553 PDE7AQ13946 482 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 NFATC4Q14934 902 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 HEPACAMQ14CZ8 416 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 RBBP5Q15291 538 aaKnown RBP9.59□□□□□ -0.87
PRPF3-206ENST00000493553 RFX4Q33E94 735 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 CCSMST1Q4G0I0 132 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 DEPDC1Q5TB30 811 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 NAIF1Q69YI7 327 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-206ENST00000493553 TRIM40Q6P9F5 258 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 GCNT7Q6ZNI0 430 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 FAM83HQ6ZRV2 1179 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-206ENST00000493553 CBLL1Q75N03 491 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 COMMD6Q7Z4G1 85 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 SPRED1Q7Z699 444 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 WFDC3Q8IUB2 231 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 SFTPA1Q8IWL2 248 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 AVL9Q8NBF6 648 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 OR4K1Q8NGD4 311 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 OR5AR1Q8NGP9 310 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 OR10A6Q8NH74 314 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 GOT1L1Q8NHS2 421 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-206ENST00000493553 RGMAQ96B86 450 aa9.59□□□□□ -0.87
PRPF3-206ENST00000493553 PPCDCQ96CD2 204 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms