RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SOX13Q9UN79 622 aa10.9□□□□□ -0.66
CACNA1C-228ENST00000492150 KLF13Q9Y2Y9 288 aaPredicted RBP10.9□□□□□ -0.66
CACNA1C-228ENST00000492150 ZNF407Q9C0G0 2248 aa10.9□□□□□ -0.66
CACNA1C-228ENST00000492150 KLRC4-KLRK1H3BQV0 150 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 CHST10O43529 356 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 PRMT3O60678 531 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 GALR3O60755 368 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 IPO7O95373 1038 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 B3GALT4O96024 378 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 FAM157CP0CG43 387 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 ZFP36L2P47974 494 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 OLR1P78380 273 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 PMPCAQ10713 525 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 HERC3Q15034 1050 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 TTLL9Q3SXZ7 439 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 FBXW10Q5XX13 1052 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 NEPROQ6NW34 567 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 ZNF549Q6P9A3 640 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 UBE2R2Q712K3 238 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 PIWIL4Q7Z3Z4 852 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 CYP4X1Q8N118 509 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 ZFP62Q8NB50 900 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 MFSD9Q8NBP5 474 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 ZNF740Q8NDX6 193 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 OR52N2Q8NGI0 321 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 PTCHD1Q96NR3 888 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 TRIM5Q9C035 493 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 SLC6A16Q9GZN6 736 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 TSPY26PQ9H489 355 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 INTS10Q9NVR2 710 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 DHRS7Q9Y394 339 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 DYSFO75923 2080 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 USF3Q68DE3 2245 aa10.89□□□□□ -0.67
CACNA1C-228ENST00000492150 TCRBV7S3A2A0A539 114 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 SAGE2PA6NJ88 616 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 USP27XA6NNY8 438 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 AP3B1O00203 1094 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 TLX2O43763 284 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 B4GALT2O60909 372 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 PDE9AO76083 593 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 SLC35G6P0C7Q6 338 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 CDH1P12830 882 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 ENO3P13929 434 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 THBS2P35442 1172 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 BTG2P78543 158 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 BASP1P80723 227 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 SIX1Q15475 284 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 CHRFAM7AQ494W8 412 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 ARHGAP11AQ6P4F7 1023 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 MBOAT1Q6ZNC8 495 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 MDGA2Q7Z553 956 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 KIAA1328Q86T90 577 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 C17orf64Q86WR6 236 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 VWA5B2Q8N398 1253 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 CD200R1Q8TD46 325 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 PIGTQ969N2 578 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 GPR21Q99679 349 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 DEFB126Q9BYW3 111 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 FAM129AQ9BZQ8 928 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 PCBD2Q9H0N5 130 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 DEFB127Q9H1M4 99 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 FBXO6Q9NRD1 293 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 VPS9D1Q9Y2B5 631 aa10.88□□□□□ -0.67
CACNA1C-228ENST00000492150 IGKV3D-11A0A0A0MRZ8 115 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 TCRBV16S1A1N1A0A5B0 115 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 A8MUA0 341 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 SYT5O00445 386 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 FCHO1O14526 889 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 AVILO75366 819 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 CNOT4O95628 575 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 NPPBP16860 134 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 ALOX12P18054 663 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 JAK1P23458 1154 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 GPR85P60893 370 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 MEF2AQ02078 507 aaPredicted RBP10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 NAE1Q13564 534 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 SNTB1Q13884 538 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 KCTD19Q17RG1 926 aaPredicted RBP10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 GXYLT1Q4G148 440 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 DEFB134Q4QY38 66 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 SEL1L2Q5TEA6 688 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 AGTRAPQ6RW13 159 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 QSOX2Q6ZRP7 698 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 DENND6AQ8IWF6 608 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 CPNE9Q8IYJ1 553 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 CYP4Z2PQ8N1L4 340 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 APCDD1LQ8NCL9 501 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 KCNJ9Q92806 393 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 ATG10Q9H0Y0 220 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 NECTIN3Q9NQS3 549 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 DEPPQ9NTK1 212 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 ADAMTS6Q9UKP5 1117 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 PDE10AQ9Y233 779 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 CAPN6Q9Y6Q1 641 aa10.87□□□□□ -0.67
CACNA1C-228ENST00000492150 CTAGE9A4FU28 777 aa10.86□□□□□ -0.67
CACNA1C-228ENST00000492150 PINLYPA6NC86 204 aa10.86□□□□□ -0.67
CACNA1C-228ENST00000492150 NDUFS4O43181 175 aa10.86□□□□□ -0.67
CACNA1C-228ENST00000492150 ZNF888P0CJ79 500 aaPredicted RBP10.86□□□□□ -0.67
CACNA1C-228ENST00000492150 EPXP11678 715 aa10.86□□□□□ -0.67
CACNA1C-228ENST00000492150 TPSB2P20231 275 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms