RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 GPR22Q99680 433 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 ERP44Q9BS26 406 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 CAPS2Q9BXY5 557 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 HES7Q9BYE0 225 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 PHACTR1Q9C0D0 580 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 RHBGQ9H310 441 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 NECTIN3Q9NQS3 549 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 GRHL1Q9NZI5 618 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 CTNNAL1Q9UBT7 734 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 PTBP2Q9UKA9 531 aaKnown RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 MTO1Q9Y2Z2 717 aaKnown RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 DYRK1BQ9Y463 629 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 FBN2P35556 2912 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 TCRBV9S1A1TA0A576 114 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 PABPN1LA6NDY0 278 aaKnown RBP7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 TMEM200CA6NKL6 621 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 SLC19A2O60779 497 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 H2AFYO75367 372 aaKnown RBP7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 PRF1P14222 555 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 CD46P15529 392 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 CD1DP15813 335 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 MAOAP21397 527 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 TPP2P29144 1249 aaPredicted RBP7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 HNRNPH1P31943 449 aaKnown RBP7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 KCNC1P48547 511 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 HLCSP50747 726 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 HSD17B7P56937 341 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 TAS2R50P59544 299 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 GPX6P59796 221 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 RAB8AP61006 207 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 STXBP1P61764 594 aaKnown RBP7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 ADORA2A-AS1P86434 159 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 PMP22Q01453 160 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 TBCCQ15814 346 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF630Q2M218 657 aaPredicted RBP7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 MFSD4BQ5TF39 518 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 SULT1C3Q6IMI6 304 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 BNC2Q6ZN30 1099 aaPredicted RBP7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 TMPRSS11BQ86T26 416 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 ZBED8Q8IZ13 594 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 TCAIMQ8N3R3 496 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 KIF2BQ8N4N8 673 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF808Q8N4W9 903 aaPredicted RBP7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 HORMAD2Q8N7B1 307 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 TMEM178AQ8NBL3 297 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 PDPRQ8NCN5 879 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 SPATA4Q8NEY3 305 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 B3GNT7Q8NFL0 401 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 OR2L5Q8NG80 312 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 GAL3ST3Q96A11 431 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 KIAA1191Q96A73 305 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 KRT12Q99456 494 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 CPNE1Q99829 537 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 TMEM79Q9BSE2 394 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 RBCK1Q9BYM8 510 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 CDCP1Q9H5V8 836 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 GPAMQ9HCL2 828 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 PRDM7Q9NQW5 492 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 KCMF1Q9P0J7 381 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 LRFN1Q9P244 771 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF223Q9UK11 482 aaPredicted RBP7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 SNX24Q9Y343 169 aa7.83□□□□□ -1.16
SMARCB1-207ENST00000491967 DCHS2Q6V1P9 2916 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 CCDC189A1A4V9 331 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 SYNDIG1LA6NDD5 238 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 TGFBR3LH3BV60 316 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 CCL21O00585 134 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 ADAM10O14672 748 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 ASNA1O43681 348 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 SLC25A12O75746 678 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 PIAS1O75925 651 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 KRT38O76015 456 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 WDR47O94967 919 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 SCELO95171 688 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 CCDC166P0CW27 439 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 TFEBP19484 476 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 CD22P20273 847 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 EEF1DP29692 281 aaKnown RBP7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 SSTR1P30872 391 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 PAFAH1B1P43034 410 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 CYB561P49447 251 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 ATP6V0D1P61421 351 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 BTN3A2P78410 334 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 SRSF11Q05519 484 aaKnown RBP7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 RBPJQ06330 500 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 SLBPQ14493 270 aaKnown RBP eCLIP7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 RBBP5Q15291 538 aaKnown RBP7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 OR4D1Q15615 310 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 TOR1AIP1Q5JTV8 583 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 ABHD17CQ6PCB6 329 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 XKRXQ6PP77 449 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 C3orf62Q6ZUJ4 267 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF572Q7Z3I7 529 aaPredicted RBP7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 GALNTL5Q7Z4T8 443 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 FGD2Q7Z6J4 655 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 UBE3DQ7Z6J8 389 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 MRGPRGQ86SM5 289 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 ISCA2Q86U28 154 aa7.82□□□□□ -1.16
SMARCB1-207ENST00000491967 SPPL2CQ8IUH8 684 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms