RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 RUNDC3AQ59EK9 446 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 TMEM63BQ5T3F8 832 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 PIP5KL1Q5T9C9 394 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 CARD17Q5XLA6 110 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 WBP2NLQ6ICG8 309 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 TMEM81Q6P7N7 255 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 C16orf89Q6UX73 402 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 RANBP10Q6VN20 620 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 ZNF571Q7Z3V5 609 aaPredicted RBP4.57□□□□□ -1.68
RTN4-215ENST00000491592 NEK8Q86SG6 692 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 GRAMD2AQ8IUY3 354 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 ZDHHC21Q8IVQ6 265 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 NELFCDQ8IXH7 590 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 ARHGAP24Q8N264 748 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 SLC25A41Q8N5S1 370 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 STKLD1Q8NE28 680 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 BPIFCQ8NFQ6 507 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 OR52L2PQ8NGH6 319 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 CDC26Q8NHZ8 85 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 SLC20A1Q8WUM9 679 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 IRGQQ8WZA9 623 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 APBB2Q92870 758 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 SLCO2A1Q92959 643 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 ART4Q93070 314 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 MOAP1Q96BY2 351 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 RHBDF1Q96CC6 855 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 OPTNQ96CV9 577 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 ZG16BQ96DA0 208 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 RNFT2Q96EX2 444 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 REXO5Q96IC2 774 aaKnown RBP4.57□□□□□ -1.68
RTN4-215ENST00000491592 ZNF333Q96JL9 665 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 RITA1Q96K30 269 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 QRFPRQ96P65 431 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 OLFM3Q96PB7 478 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 TGS1Q96RS0 853 aaKnown RBP4.57□□□□□ -1.68
RTN4-215ENST00000491592 KCNS3Q9BQ31 491 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 SYT15Q9BQS2 421 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 C11orf70Q9BRQ4 267 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 WDR83Q9BRX9 315 aaKnown RBP4.57□□□□□ -1.68
RTN4-215ENST00000491592 GPR88Q9GZN0 384 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 MVB12BQ9H7P6 319 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 FGFR1OP2Q9NVK5 253 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 P4HTMQ9NXG6 502 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 GAR1Q9NY12 217 aaKnown RBP4.57□□□□□ -1.68
RTN4-215ENST00000491592 HAO2Q9NYQ3 351 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 SENP1Q9P0U3 644 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 DLGAP2Q9P1A6 1054 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 ATXN10Q9UBB4 475 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 DNAJB4Q9UDY4 337 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 LGALS13Q9UHV8 139 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 MKLN1Q9UL63 735 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 PACSIN2Q9UNF0 486 aaPredicted RBP4.57□□□□□ -1.68
RTN4-215ENST00000491592 MFHAS1Q9Y4C4 1052 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 TRPM3Q9HCF6 1732 aaPredicted RBP4.57□□□□□ -1.68
RTN4-215ENST00000491592 LRP5O75197 1615 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 PAPPAQ13219 1627 aa4.57□□□□□ -1.68
RTN4-215ENST00000491592 MEGF6O75095 1541 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 KCPQ6ZWJ8 1503 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 COL1A1P02452 1464 aaPredicted RBP4.56□□□□□ -1.68
RTN4-215ENST00000491592 TNS2Q63HR2 1409 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 ROBO3Q96MS0 1386 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 COL18A1P39060 1754 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 LOC105369274A0A096LPK9 316 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 LOC102723532A0A0G2JNH3 316 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.56□□□□□ -1.68
RTN4-215ENST00000491592 HELTA6NFD8 242 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 PP2D1A8MPX8 630 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 ERVV-1B6SEH8 477 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 KBTBD13C9JR72 458 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 POC1B-GALNT4F8VUJ3 575 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 M0QYT0 321 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 XPO1O14980 1071 aaKnown RBP4.56□□□□□ -1.68
RTN4-215ENST00000491592 LDLRAD4O15165 306 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 HDAC3O15379 428 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 SPRY1O43609 319 aaPredicted RBP4.56□□□□□ -1.68
RTN4-215ENST00000491592 CBR3O75828 277 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 CELF2O95319 508 aaKnown RBP4.56□□□□□ -1.68
RTN4-215ENST00000491592 C1RP00736 705 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 SHBGP04278 402 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 PGK2P07205 417 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 UMPSP11172 480 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 G6PDP11413 515 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 UCHL3P15374 230 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 ITGA3P26006 1051 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 MARK3P27448 753 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 NDUFS1P28331 727 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 DUSP1P28562 367 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 CDC25CP30307 473 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 EVI2BP34910 448 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 GALCP54803 685 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 FAM3BP58499 235 aaPredicted RBP4.56□□□□□ -1.68
RTN4-215ENST00000491592 RPL26P61254 145 aaKnown RBP4.56□□□□□ -1.68
RTN4-215ENST00000491592 VBP1P61758 197 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 TSPAN5P62079 268 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 MZT1Q08AG7 82 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 CALCOCO2Q13137 446 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 ITGA9Q13797 1035 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 USF2Q15853 346 aaPredicted RBP4.56□□□□□ -1.68
RTN4-215ENST00000491592 CCDC6Q16204 474 aa4.56□□□□□ -1.68
RTN4-215ENST00000491592 EXOC3L4Q17RC7 722 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms