RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 GPAMQ9HCL2 828 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 MMP25Q9NPA2 562 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 PNO1Q9NRX1 252 aaKnown RBP8.33□□□□□ -1.08
HDAC3-211ENST00000491581 LRFN1Q9P244 771 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 ABI3Q9P2A4 366 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 COPG2Q9UBF2 871 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 TNFRSF10DQ9UBN6 386 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 CTNNAL1Q9UBT7 734 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 DYRK1BQ9Y463 629 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 OARD1Q9Y530 152 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 SAR1BQ9Y6B6 198 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 CNTRLQ7Z7A1 2325 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 TRBV11-1A0A0K0K1C0 115 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 TCRBV9S1A1TA0A576 114 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 TCRBV16S1A1N1A0A5B0 115 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 ESYT3A0FGR9 886 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 TMEM200CA6NKL6 621 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 ERI3O43414 337 aaKnown RBP8.32□□□□□ -1.08
HDAC3-211ENST00000491581 PRMT3O60678 531 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 SLC19A2O60779 497 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 PDE9AO76083 593 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 SP1P08047 785 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 C1GALT1C1LP0DN25 315 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 CD1DP15813 335 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 CCND1P24385 295 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 HRH2P25021 359 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 CA7P43166 264 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 AP1S2P56377 157 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 SLC7A5Q01650 507 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 RGS1Q08116 209 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 PWP1Q13610 501 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 BMPR2Q13873 1038 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 HERC3Q15034 1050 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 TGFBIQ15582 683 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 MEP1AQ16819 746 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 XKR6Q5GH73 641 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 LRRC8EQ6NSJ5 796 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 ZDHHC24Q6UX98 284 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 ZNF793Q6ZN11 406 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 DGAT2L6Q6ZPD8 337 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 FRA10AC1Q70Z53 315 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 UBE3DQ7Z6J8 389 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 GALNT7Q86SF2 657 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 CCDC25Q86WR0 208 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 RPS19BP1Q86WX3 136 aaKnown RBP8.32□□□□□ -1.08
HDAC3-211ENST00000491581 GPSM1Q86YR5 675 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 SIAH3Q8IW03 269 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 OR4N5Q8IXE1 308 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 SNX31Q8N9S9 440 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 APCDD1LQ8NCL9 501 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 RELTQ969Z4 430 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 PDLIM5Q96HC4 596 aaKnown RBP8.32□□□□□ -1.08
HDAC3-211ENST00000491581 ZNF354BQ96LW1 612 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 QRFPRQ96P65 431 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 NAT9Q9BTE0 207 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 TRIM54Q9BYV2 358 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 RNF32Q9H0A6 362 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 RHOJQ9H4E5 214 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 PELI2Q9HAT8 420 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 DEPPQ9NTK1 212 aa8.32□□□□□ -1.08
HDAC3-211ENST00000491581 C19orf25Q9UFG5 118 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-211ENST00000491581 SPTBN1Q01082 2364 aaKnown RBP8.32□□□□□ -1.08
HDAC3-211ENST00000491581 UNC79Q9P2D8 2635 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 A0A1W2PS29 197 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 LRIT2A6NDA9 550 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 PABPN1LA6NDY0 278 aaKnown RBP8.31□□□□□ -1.08
HDAC3-211ENST00000491581 SAGE2PA6NJ88 616 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 UBXN8O00124 270 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 HRKO00198 91 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 ADAM10O14672 748 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 CLGNO14967 610 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 LDB3O75112 727 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 SLC25A12O75746 678 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 ENO2P09104 434 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-211ENST00000491581 RNH1P13489 461 aaKnown RBP8.31□□□□□ -1.08
HDAC3-211ENST00000491581 ICAM2P13598 275 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 EEF1DP29692 281 aaKnown RBP8.31□□□□□ -1.08
HDAC3-211ENST00000491581 AHRP35869 848 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 KIR3DL1P43629 444 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 MEOX1P50221 254 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 MLF1P58340 268 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 ALDH6A1Q02252 535 aaKnown RBP8.31□□□□□ -1.08
HDAC3-211ENST00000491581 DOC2AQ14183 400 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 EXT1Q16394 746 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 KBTBD12Q3ZCT8 623 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 SLC25A25Q6KCM7 469 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 SULF2Q8IWU5 870 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 MCEMP1Q8IX19 187 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 KLHDC8AQ8IYD2 350 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 MARVELD2Q8N4S9 558 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 SUN3Q8TAQ9 357 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 NCLNQ969V3 563 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 GPR137Q96N19 417 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 OR1F2PQ96R84 312 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 RBBP8Q99708 897 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 MAPKAP1Q9BPZ7 522 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 AIF1LQ9BQI0 150 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 ALG9Q9H6U8 611 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 PRDM9Q9NQV7 894 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 PRTFDC1Q9NRG1 225 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms