RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PRMT3O60678 531 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 WDPCPO95876 746 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 PLA2G16P53816 162 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 BTG2P78543 158 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 CHIT1Q13231 466 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 FAM83EQ2M2I3 478 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 GLE1Q53GS7 698 aaKnown RBP16.67■□□□□ 0.26
ITGB1-215ENST00000488494 FHL5Q5TD97 284 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 CYP4X1Q8N118 509 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 OR1N1Q8NGS0 311 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 KIF18AQ8NI77 898 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 GRHL3Q8TE85 626 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 PTCHD1Q96NR3 888 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 BARD1Q99728 777 aaKnown RBP16.67■□□□□ 0.26
ITGB1-215ENST00000488494 FUT8Q9BYC5 575 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 REXO4Q9GZR2 422 aaKnown RBP16.67■□□□□ 0.26
ITGB1-215ENST00000488494 RNF32Q9H0A6 362 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.67■□□□□ 0.261e-8■■■■□ 23.7
ITGB1-215ENST00000488494 KCNK13Q9HB14 408 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 PRM3Q9NNZ6 103 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 AGPAT4Q9NRZ5 378 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 TEKT2Q9UIF3 430 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 USP9YO00507 2555 aaPredicted RBP16.67■□□□□ 0.26
ITGB1-215ENST00000488494 A0A088AWK7 358 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 IGKV3D-11A0A0A0MRZ8 115 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 TRAV17A0A0B4J275 112 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 K7EPI3 171 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 TBX6O95947 436 aaPredicted RBP16.66■□□□□ 0.26
ITGB1-215ENST00000488494 INHBAP08476 426 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 MTHFD2P13995 350 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 GFAPP14136 432 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 ZNF10P21506 573 aaPredicted RBP16.66■□□□□ 0.26
ITGB1-215ENST00000488494 CERS1P27544 350 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 TYK2P29597 1187 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 HPDP32754 393 aaPredicted RBP16.66■□□□□ 0.26
ITGB1-215ENST00000488494 MSH2P43246 934 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 SLC26A5P58743 744 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 LAPTM5Q13571 262 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 TBCCQ15814 346 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 EIF2S3LQ2VIR3 472 aaKnown RBP16.66■□□□□ 0.26
ITGB1-215ENST00000488494 ADPRMQ3LIE5 342 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 KLC3Q6P597 504 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 TRIM40Q6P9F5 258 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 FAM180AQ6UWF9 173 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 FAM47BQ8NA70 645 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 OR2L5Q8NG80 312 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 RHEBL1Q8TAI7 183 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 M1APQ8TC57 530 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 SLC44A1Q8WWI5 657 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 QRFPRQ96P65 431 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 PAFAH2Q99487 392 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 VPS11Q9H270 941 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 COPS7BQ9H9Q2 264 aaPredicted RBP16.66■□□□□ 0.26
ITGB1-215ENST00000488494 MMP25Q9NPA2 562 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 PRDM9Q9NQV7 894 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 ZNF490Q9ULM2 529 aaPredicted RBP16.66■□□□□ 0.26
ITGB1-215ENST00000488494 DOPEY2Q9Y3R5 2298 aa16.66■□□□□ 0.26
ITGB1-215ENST00000488494 TCRBV16S1A1N1A0A5B0 115 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 OR5H15A6NDH6 313 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 ANKUB1A6NFN9 424 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 E2F3O00716 465 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 B3GALT2O43825 422 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 SEMA7AO75326 666 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 KLHL2O95198 593 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 CBX6O95503 412 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 SETDB1Q15047 1291 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 HIST2H2ACQ16777 129 aaPredicted RBP16.65■□□□□ 0.26
ITGB1-215ENST00000488494 PFKFB4Q16877 469 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 ACER2Q5QJU3 275 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 HIST2H2AA3Q6FI13 130 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 TAOK1Q7L7X3 1001 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 BEST3Q8N1M1 668 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 UHMK1Q8TAS1 419 aaKnown RBP16.65■□□□□ 0.26
ITGB1-215ENST00000488494 PRR7Q8TB68 274 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 HAS2Q92819 552 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 NECTIN3Q9NQS3 549 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 IKBKGQ9Y6K9 419 aa16.65■□□□□ 0.26
ITGB1-215ENST00000488494 CCDC189A1A4V9 331 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 BLACEA4D250 179 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 SAGE2PA6NJ88 616 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 PCNAP12004 261 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 EPB42P16452 691 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 CASP2P42575 452 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 RAB38P57729 211 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 RUNX2Q13950 521 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 E2F2Q14209 437 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 ELOAQ14241 798 aaKnown RBP16.64■□□□□ 0.25
ITGB1-215ENST00000488494 NAA30Q147X3 362 aaPredicted RBP16.64■□□□□ 0.25
ITGB1-215ENST00000488494 ACAP2Q15057 778 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 INAQ16352 499 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 H3F3CQ6NXT2 135 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 MED27Q6P2C8 311 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 ABHD17CQ6PCB6 329 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 MYLK4Q86YV6 388 aaPredicted RBP16.64■□□□□ 0.25
ITGB1-215ENST00000488494 CRLF3Q8IUI8 442 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 KIF2BQ8N4N8 673 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 SLC5A8Q8N695 610 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 TEX9Q8N6V9 391 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 ARMC2Q8NEN0 867 aa16.64■□□□□ 0.25
ITGB1-215ENST00000488494 TRIM44Q96DX7 344 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms