RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 H3BQF6 201 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 FFAR3O14843 346 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 GPR42O15529 346 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 CHST10O43529 356 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 ALOX12BO75342 701 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 ERLIN1O75477 346 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 SEMA3DO95025 777 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 ZIC2O95409 532 aaPredicted RBP14.99□□□□□ -0.01
UPF3A-208ENST00000484246 HPP00738 406 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 HEXBP07686 556 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 FHP07954 510 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 MYL2P10916 166 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 PCNAP12004 261 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 RNH1P13489 461 aaKnown RBP14.99□□□□□ -0.01
UPF3A-208ENST00000484246 MTTPP55157 894 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 RHAGQ02094 409 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 CUL3Q13618 768 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 ZRSR2Q15696 482 aaKnown RBP14.99□□□□□ -0.01
UPF3A-208ENST00000484246 CPSF6Q16630 551 aaKnown RBP eCLIP14.99□□□□□ -0.012e-7■■■□□ 16.2
UPF3A-208ENST00000484246 TNFAIP8L3Q5GJ75 292 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 DEPDC1Q5TB30 811 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 KHDRBS2Q5VWX1 349 aaKnown RBP14.99□□□□□ -0.01
UPF3A-208ENST00000484246 FRG2Q64ET8 278 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 LETMD1Q6P1Q0 360 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 LRIG3Q6UXM1 1119 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 CHSY3Q70JA7 882 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 UBE3DQ7Z6J8 389 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 MYLK4Q86YV6 388 aaPredicted RBP14.99□□□□□ -0.01
UPF3A-208ENST00000484246 CA13Q8N1Q1 262 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 PLPP5Q8NEB5 264 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 FRG2BQ96QU4 278 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 TBCDQ9BTW9 1192 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 YIPF2Q9BWQ6 316 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 PRDM7Q9NQW5 492 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 ACSS2Q9NR19 701 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 MKL2Q9ULH7 1088 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 PLLPQ9Y342 182 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 PCDHGB7Q9Y5F8 929 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 IGSF10Q6WRI0 2623 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 SMG1Q96Q15 3661 aaKnown RBP14.99□□□□□ -0.01
UPF3A-208ENST00000484246 MDC1Q14676 2089 aaKnown RBP14.99□□□□□ -0.01
UPF3A-208ENST00000484246 ANKRD12Q6UB98 2062 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 MAGEB17A8MXT2 336 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 B3GALT2O43825 422 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 JRKO75564 520 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 SUPT7LO94864 414 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 B3GALT4O96024 378 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 C8orf89P0DMQ9 161 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 COX6A1P12074 109 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 CDH13P55290 713 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 BTN3A2P78410 334 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 LCP2Q13094 533 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 AIMP2Q13155 320 aaKnown RBP14.98□□□□□ -0.01
UPF3A-208ENST00000484246 LY6DQ14210 128 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 KRT71Q3SY84 523 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 BEND6Q5SZJ8 279 aaPredicted RBP14.98□□□□□ -0.01
UPF3A-208ENST00000484246 TCTN3Q6NUS6 607 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 QSOX2Q6ZRP7 698 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 MILR1Q7Z6M3 343 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 SRRM1Q8IYB3 904 aaKnown RBP14.98□□□□□ -0.01
UPF3A-208ENST00000484246 PRSS58Q8IYP2 241 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 SHISA5Q8N114 240 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 CLEC1AQ8NC01 280 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 OR4F6Q8NGB9 312 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 C9orf43Q8TAL5 461 aaPredicted RBP14.98□□□□□ -0.01
UPF3A-208ENST00000484246 ATP6V1E2Q96A05 226 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 PEX11GQ96HA9 241 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 FAR2Q96K12 515 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 CDK15Q96Q40 435 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 F2RL3Q96RI0 385 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 CENPKQ9BS16 269 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 SLC29A3Q9BZD2 475 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 SEMA4CQ9C0C4 833 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 SLC25A18Q9H1K4 315 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 GSTO2Q9H4Y5 243 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 LYRM4Q9HD34 91 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 SEMA4BQ9NPR2 832 aaPredicted RBP14.98□□□□□ -0.01
UPF3A-208ENST00000484246 ZNF225Q9UK10 706 aa14.98□□□□□ -0.01
UPF3A-208ENST00000484246 IGKV3D-11A0A0A0MRZ8 115 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 A0A1B0GTL3 188 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 SYNDIG1LA6NDD5 238 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 KLHL41O60662 606 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 DNAJB6O75190 326 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 DNAJB5O75953 348 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 CPA3P15088 417 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 HIST1H1TP22492 207 aaPredicted RBP14.97□□□□□ -0.01
UPF3A-208ENST00000484246 ATP5A1P25705 553 aaKnown RBP14.97□□□□□ -0.01
UPF3A-208ENST00000484246 PTX3P26022 381 aaPredicted RBP14.97□□□□□ -0.01
UPF3A-208ENST00000484246 PLA2G16P53816 162 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 PKNOX1P55347 436 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 RAB38P57729 211 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 OLR1P78380 273 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 ZNF33BQ06732 778 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 CHAF1BQ13112 559 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 RUNX2Q13950 521 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 RCN2Q14257 317 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 MINDY4Q4G0A6 757 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 ZNF793Q6ZN11 406 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 GPRIN3Q6ZVF9 776 aa14.97□□□□□ -0.01
UPF3A-208ENST00000484246 RPS27LQ71UM5 84 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms